| See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages |
Data as of Fri. 6 Nov 2026.
The number reported next to each package name is the download score, that is, the average number of distinct IPs that "hit" the package each month for the last 12 months (not counting the current month).
All annotation package stats in one file: annotation_pkg_stats.tab
All annotation download scores in one file: annotation_pkg_scores.tab
See Download stats for Bioconductor annotation repository (all packages combined)
BSgenome.Amellifera.BeeBase.assembly4 (173)
BSgenome.Amellifera.NCBI.AmelHAv3.1 (97)
BSgenome.Amellifera.UCSC.apiMel2 (181)
BSgenome.Amellifera.UCSC.apiMel2.masked (167)
BSgenome.Aofficinalis.NCBI.V1 (104)
BSgenome.Athaliana.TAIR.01222004 (17)
BSgenome.Athaliana.TAIR.04232008 (188)
BSgenome.Athaliana.TAIR.TAIR9 (250)
BSgenome.Btaurus.UCSC.bosTau3 (207)
BSgenome.Btaurus.UCSC.bosTau3.masked (144)
BSgenome.Btaurus.UCSC.bosTau4 (191)
BSgenome.Btaurus.UCSC.bosTau4.masked (145)
BSgenome.Btaurus.UCSC.bosTau6 (179)
BSgenome.Btaurus.UCSC.bosTau6.masked (152)
BSgenome.Btaurus.UCSC.bosTau8 (146)
BSgenome.Btaurus.UCSC.bosTau9 (127)
BSgenome.Btaurus.UCSC.bosTau9.masked (94)
BSgenome.Carietinum.NCBI.v1 (109)
BSgenome.Celegans.UCSC.ce10 (273)
BSgenome.Celegans.UCSC.ce11 (531)
BSgenome.Celegans.UCSC.ce2 (1009)
BSgenome.Celegans.UCSC.ce6 (188)
BSgenome.Cfamiliaris.UCSC.canFam2 (207)
BSgenome.Cfamiliaris.UCSC.canFam2.masked (134)
BSgenome.Cfamiliaris.UCSC.canFam3 (213)
BSgenome.Cfamiliaris.UCSC.canFam3.masked (143)
BSgenome.Cjacchus.UCSC.calJac3 (99)
BSgenome.Cjacchus.UCSC.calJac4 (90)
BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (121)
BSgenome.Creinhardtii.JGI.v5.6 (99)
BSgenome.Dmelanogaster.BDGP.Release5 (4)
BSgenome.Dmelanogaster.FlyBase.r51 (10)
BSgenome.Dmelanogaster.UCSC.dm2 (220)
BSgenome.Dmelanogaster.UCSC.dm2.masked (146)
BSgenome.Dmelanogaster.UCSC.dm3 (869)
BSgenome.Dmelanogaster.UCSC.dm3.masked (160)
BSgenome.Dmelanogaster.UCSC.dm6 (273)
BSgenome.Drerio.UCSC.danRer10 (200)
BSgenome.Drerio.UCSC.danRer11 (191)
BSgenome.Drerio.UCSC.danRer5 (185)
BSgenome.Drerio.UCSC.danRer6.masked (142)
BSgenome.Drerio.UCSC.danRer7 (326)
BSgenome.Drerio.UCSC.danRer7.masked (147)
BSgenome.Dvirilis.Ensembl.dvircaf1 (95)
BSgenome.Ecoli.NCBI.20080805 (343)
BSgenome.Gaculeatus.UCSC.gasAcu1 (179)
BSgenome.Gaculeatus.UCSC.gasAcu1.masked (155)
BSgenome.Ggallus.UCSC.galGal3 (249)
BSgenome.Ggallus.UCSC.galGal3.masked (183)
BSgenome.Ggallus.UCSC.galGal4 (187)
BSgenome.Ggallus.UCSC.galGal4.masked (174)
BSgenome.Ggallus.UCSC.galGal5 (116)
BSgenome.Ggallus.UCSC.galGal6 (117)
BSgenome.Hsapiens.1000genomes.hs37d5 (486)
BSgenome.Hsapiens.NCBI.b36v3 (4)
BSgenome.Hsapiens.NCBI.GRCh38 (1017)
BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (106)
BSgenome.Hsapiens.UCSC.hg16 (9)
BSgenome.Hsapiens.UCSC.hg17 (213)
BSgenome.Hsapiens.UCSC.hg17.masked (140)
BSgenome.Hsapiens.UCSC.hg18 (887)
BSgenome.Hsapiens.UCSC.hg18.masked (161)
BSgenome.Hsapiens.UCSC.hg19 (2841)
BSgenome.Hsapiens.UCSC.hg19.masked (461)
BSgenome.Hsapiens.UCSC.hg38 (4988)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (102)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (100)
BSgenome.Hsapiens.UCSC.hg38.masked (475)
BSgenome.Hsapiens.UCSC.hs1 (101)
BSgenome.Mdomestica.UCSC.monDom5 (105)
BSgenome.Mfascicularis.NCBI.5.0 (122)
BSgenome.Mfascicularis.NCBI.6.0 (95)
BSgenome.Mfuro.UCSC.musFur1 (126)
BSgenome.Mmulatta.UCSC.rheMac10 (129)
BSgenome.Mmulatta.UCSC.rheMac2 (172)
BSgenome.Mmulatta.UCSC.rheMac2.masked (142)
BSgenome.Mmulatta.UCSC.rheMac3 (156)
BSgenome.Mmulatta.UCSC.rheMac3.masked (138)
BSgenome.Mmulatta.UCSC.rheMac8 (116)
BSgenome.Mmusculus.UCSC.mm10 (2152)
BSgenome.Mmusculus.UCSC.mm10.masked (167)
BSgenome.Mmusculus.UCSC.mm39 (669)
BSgenome.Mmusculus.UCSC.mm6 (4)
BSgenome.Mmusculus.UCSC.mm7 (10)
BSgenome.Mmusculus.UCSC.mm8 (214)
BSgenome.Mmusculus.UCSC.mm8.masked (157)
BSgenome.Mmusculus.UCSC.mm9 (397)
BSgenome.Ppaniscus.UCSC.panPan1 (93)
BSgenome.Ppaniscus.UCSC.panPan2 (94)
BSgenome.Ptroglodytes.UCSC.panTro2 (191)
BSgenome.Ptroglodytes.UCSC.panTro2.masked (147)
BSgenome.Ptroglodytes.UCSC.panTro3 (169)
BSgenome.Ptroglodytes.UCSC.panTro3.masked (139)
BSgenome.Ptroglodytes.UCSC.panTro5 (115)
BSgenome.Ptroglodytes.UCSC.panTro6 (106)
BSgenome.Rnorvegicus.UCSC.rn4 (224)
BSgenome.Rnorvegicus.UCSC.rn4.masked (139)
BSgenome.Rnorvegicus.UCSC.rn5 (453)
BSgenome.Rnorvegicus.UCSC.rn5.masked (147)
BSgenome.Rnorvegicus.UCSC.rn6 (462)
BSgenome.Rnorvegicus.UCSC.rn7 (127)
BSgenome.Scerevisiae.UCSC.sacCer1 (512)
BSgenome.Scerevisiae.UCSC.sacCer2 (849)
BSgenome.Scerevisiae.UCSC.sacCer3 (486)
BSgenome.Sscrofa.UCSC.susScr11 (121)
BSgenome.Sscrofa.UCSC.susScr3 (148)
BSgenome.Sscrofa.UCSC.susScr3.masked (135)
BSgenome.Tgondii.ToxoDB.7.0 (159)
BSgenome.Tguttata.UCSC.taeGut1 (132)
BSgenome.Tguttata.UCSC.taeGut1.masked (142)
BSgenome.Tguttata.UCSC.taeGut2 (113)
BSgenome.Vvinifera.URGI.IGGP12Xv0 (116)
BSgenome.Vvinifera.URGI.IGGP12Xv2 (122)
clariomdhumanprobeset.db (177)
clariomdhumantranscriptcluster.db (369)
clariomshumanhttranscriptcluster.db (201)
clariomshumantranscriptcluster.db (340)
clariomsmousehttranscriptcluster.db (169)
clariomsmousetranscriptcluster.db (239)
clariomsrathttranscriptcluster.db (150)
HsAgilentDesign026652.db (280)
hta20sttranscriptcluster.db (29)
hta20transcriptcluster.db (567)
huex10sttranscriptcluster.db (417)
HuExExonProbesetLocation (174)
HuExExonProbesetLocationHg18 (180)
HuExExonProbesetLocationHg19 (181)
hugene.1.0.st.v1frmavecs (109)
hugene10sttranscriptcluster.db (1302)
hugene11sttranscriptcluster.db (444)
hugene20sttranscriptcluster.db (652)
hugene21sttranscriptcluster.db (425)
humancytosnp12v2p1hCrlmm (106)
illuminaHumanDASLBeadID.db (23)
IlluminaHumanMethylation27k.db (276)
IlluminaHumanMethylation27kanno.ilmn12.hg19 (298)
IlluminaHumanMethylation27kmanifest (191)
IlluminaHumanMethylation450k.db (118)
IlluminaHumanMethylation450kanno.ilmn12.hg19 (2851)
IlluminaHumanMethylation450kannotation.ilmn.v1.2 (13)
IlluminaHumanMethylation450kmanifest (1772)
IlluminaHumanMethylation450kprobe (192)
IlluminaHumanMethylationEPICanno.ilm10b2.hg19 (441)
IlluminaHumanMethylationEPICanno.ilm10b3.hg19 (112)
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1677)
IlluminaHumanMethylationEPICmanifest (1448)
IlluminaHumanMethylationEPICv2anno.20a1.hg38 (1096)
IlluminaHumanMethylationEPICv2manifest (1031)
IlluminaHumanMethylationMSAanno.ilm10a1.hg38 (92)
MafDb.1Kgenomes.phase1.GRCh38 (147)
MafDb.1Kgenomes.phase1.hs37d5 (184)
MafDb.1Kgenomes.phase3.GRCh38 (161)
MafDb.1Kgenomes.phase3.hs37d5 (187)
MafDb.ALL.wgs.phase1.release.v3.20101123 (56)
MafDb.ALL.wgs.phase3.release.v5a.20130502 (8)
MafDb.ALL.wgs.phase3.release.v5b.20130502 (8)
MafDb.ESP6500SI.V2.SSA137 (27)
MafDb.ESP6500SI.V2.SSA137.dbSNP138 (25)
MafDb.ESP6500SI.V2.SSA137.GRCh38 (40)
MafDb.ESP6500SI.V2.SSA137.hs37d5 (36)
MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 (11)
MafDb.ExAC.r0.3.1.snvs.hs37d5 (13)
MafDb.ExAC.r1.0.nonTCGA.GRCh38 (139)
MafDb.ExAC.r1.0.nonTCGA.hs37d5 (180)
MafDb.gnomAD.r2.0.1.GRCh38 (23)
MafDb.gnomAD.r2.0.1.hs37d5 (22)
MafDb.gnomAD.r2.1.GRCh38 (145)
MafDb.gnomAD.r2.1.hs37d5 (148)
MafDb.gnomADex.r2.0.1.GRCh38 (21)
MafDb.gnomADex.r2.0.1.hs37d5 (32)
MafDb.gnomADex.r2.1.GRCh38 (136)
MafDb.gnomADex.r2.1.hs37d5 (142)
MafDb.TOPMed.freeze5.hg19 (147)
MafDb.TOPMed.freeze5.hg38 (144)
MafH5.gnomAD.v3.1.1.GRCh38 (29)
MafH5.gnomAD.v3.1.2.GRCh38 (32)
MafH5.gnomAD.v4.0.GRCh38 (116)
mamurhesusmamuentrezgprobe (4)
Masks.Dmelanogaster.UCSC.dm3 (12)
MeSH.Eco.K12.MG1655.eg.db (52)
MeSH.Eco.O127.H6.E2348.69.eg.db (15)
MeSH.Eco.O157.H7.EDL933.eg.db (16)
MeSH.Eco.O157.H7.Sakai.eg.db (46)
MmAgilentDesign026655.db (235)
moex10sttranscriptcluster.db (313)
MoExExonProbesetLocation (282)
mogene10sttranscriptcluster.db (422)
mogene11sttranscriptcluster.db (282)
mogene20sttranscriptcluster.db (340)
mogene21sttranscriptcluster.db (259)
mta10sttranscriptcluster.db (28)
org.MeSH.Eco.K12.DH10B.db (25)
org.MeSH.Eco.K12.MG1655.db (29)
org.MeSH.Eco.O103.H2.12009.db (22)
org.MeSH.Eco.O111.H.11128.db (26)
org.MeSH.Eco.O127.H6.E2348.69.db (24)
org.MeSH.Eco.O157.H7.EC4115.db (24)
org.MeSH.Eco.O157.H7.EDL933.db (25)
org.MeSH.Eco.O157.H7.Sakai.db (28)
org.MeSH.Eco.O157.H7.TW14359.db (22)
org.MeSH.Eco.O26.H11.11368.db (21)
pd.081229.hg18.promoter.medip.hx1 (214)
pd.2006.07.18.hg18.refseq.promoter (258)
pd.2006.07.18.mm8.refseq.promoter (224)
raex10sttranscriptcluster.db (167)
RaExExonProbesetLocation (268)
ragene10sttranscriptcluster.db (251)
ragene11sttranscriptcluster.db (252)
ragene20sttranscriptcluster.db (223)
ragene21sttranscriptcluster.db (218)
SNPlocs.Hsapiens.dbSNP.20071016 (21)
SNPlocs.Hsapiens.dbSNP.20080617 (20)
SNPlocs.Hsapiens.dbSNP.20090506 (89)
SNPlocs.Hsapiens.dbSNP.20100427 (88)
SNPlocs.Hsapiens.dbSNP.20101109 (388)
SNPlocs.Hsapiens.dbSNP.20110815 (85)
SNPlocs.Hsapiens.dbSNP.20111119 (73)
SNPlocs.Hsapiens.dbSNP.20120608 (115)
SNPlocs.Hsapiens.dbSNP141.GRCh38 (71)
SNPlocs.Hsapiens.dbSNP142.GRCh37 (86)
SNPlocs.Hsapiens.dbSNP144.GRCh37 (505)
SNPlocs.Hsapiens.dbSNP144.GRCh38 (643)
TxDb.Athaliana.BioMart.plantsmart10 (61)
TxDb.Athaliana.BioMart.plantsmart12 (61)
TxDb.Athaliana.BioMart.plantsmart14 (47)
TxDb.Athaliana.BioMart.plantsmart16 (44)
TxDb.Athaliana.BioMart.plantsmart19 (27)
TxDb.Athaliana.BioMart.plantsmart21 (18)
TxDb.Athaliana.BioMart.plantsmart22 (746)
TxDb.Athaliana.BioMart.plantsmart25 (247)
TxDb.Athaliana.BioMart.plantsmart28 (319)
TxDb.Athaliana.BioMart.plantsmart51 (148)
TxDb.Celegans.UCSC.ce11.ensGene (572)
TxDb.Celegans.UCSC.ce11.refGene (259)
TxDb.Celegans.UCSC.ce6.ensGene (482)
TxDb.Cfamiliaris.UCSC.canFam3.refGene (159)
TxDb.Cfamiliaris.UCSC.canFam4.refGene (124)
TxDb.Cfamiliaris.UCSC.canFam5.refGene (106)
TxDb.Cfamiliaris.UCSC.canFam6.refGene (105)
TxDb.Dmelanogaster.UCSC.dm3.ensGene (1160)
TxDb.Dmelanogaster.UCSC.dm6.ensGene (366)
TxDb.Drerio.UCSC.danRer10.refGene (271)
TxDb.Drerio.UCSC.danRer11.refGene (219)
TxDb.Ggallus.UCSC.galGal4.refGene (184)
TxDb.Ggallus.UCSC.galGal5.refGene (192)
TxDb.Ggallus.UCSC.galGal6.refGene (151)
TxDb.Hsapiens.BioMart.igis (161)
TxDb.Hsapiens.UCSC.hg18.knownGene (838)
TxDb.Hsapiens.UCSC.hg19.knownGene (6258)
TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts (577)
TxDb.Hsapiens.UCSC.hg19.refGene (112)
TxDb.Hsapiens.UCSC.hg38.knownGene (3918)
TxDb.Mmulatta.UCSC.rheMac3.refGene (175)
TxDb.Mmulatta.UCSC.rheMac8.refGene (189)
TxDb.Mmusculus.UCSC.mm10.ensGene (310)
TxDb.Mmusculus.UCSC.mm10.knownGene (2191)
TxDb.Mmusculus.UCSC.mm39.knownGene (336)
TxDb.Mmusculus.UCSC.mm39.refGene (216)
TxDb.Mmusculus.UCSC.mm9.knownGene (893)
TxDb.Ptroglodytes.UCSC.panTro4.refGene (165)
TxDb.Ptroglodytes.UCSC.panTro5.refGene (134)
TxDb.Ptroglodytes.UCSC.panTro6.refGene (128)
TxDb.Rnorvegicus.BioMart.igis (151)
TxDb.Rnorvegicus.UCSC.rn4.ensGene (408)
TxDb.Rnorvegicus.UCSC.rn5.refGene (537)
TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq (104)
TxDb.Rnorvegicus.UCSC.rn6.refGene (306)
TxDb.Rnorvegicus.UCSC.rn7.refGene (182)
TxDb.Scerevisiae.UCSC.sacCer2.ensGene (6)
TxDb.Scerevisiae.UCSC.sacCer2.sgdGene (193)
TxDb.Scerevisiae.UCSC.sacCer3.sgdGene (325)