See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages |
Data as of Fri. 14 Feb 2025.
The number reported next to each package name is the download score, that is, the average number of distinct IPs that "hit" the package each month for the last 12 months (not counting the current month).
All annotation package stats in one file: annotation_pkg_stats.tab
All annotation download scores in one file: annotation_pkg_scores.tab
See Download stats for Bioconductor annotation repository (all packages combined)
BSgenome.Amellifera.BeeBase.assembly4 (41)
BSgenome.Amellifera.NCBI.AmelHAv3.1 (23)
BSgenome.Amellifera.UCSC.apiMel2 (41)
BSgenome.Amellifera.UCSC.apiMel2.masked (28)
BSgenome.Aofficinalis.NCBI.V1 (24)
BSgenome.Athaliana.TAIR.01222004 (8)
BSgenome.Athaliana.TAIR.04232008 (43)
BSgenome.Athaliana.TAIR.TAIR9 (80)
BSgenome.Btaurus.UCSC.bosTau3 (53)
BSgenome.Btaurus.UCSC.bosTau3.masked (31)
BSgenome.Btaurus.UCSC.bosTau4 (47)
BSgenome.Btaurus.UCSC.bosTau4.masked (28)
BSgenome.Btaurus.UCSC.bosTau6 (52)
BSgenome.Btaurus.UCSC.bosTau6.masked (48)
BSgenome.Btaurus.UCSC.bosTau8 (33)
BSgenome.Btaurus.UCSC.bosTau9 (36)
BSgenome.Btaurus.UCSC.bosTau9.masked (22)
BSgenome.Carietinum.NCBI.v1 (26)
BSgenome.Celegans.UCSC.ce10 (75)
BSgenome.Celegans.UCSC.ce11 (121)
BSgenome.Celegans.UCSC.ce2 (354)
BSgenome.Celegans.UCSC.ce6 (50)
BSgenome.Cfamiliaris.UCSC.canFam2 (42)
BSgenome.Cfamiliaris.UCSC.canFam2.masked (28)
BSgenome.Cfamiliaris.UCSC.canFam3 (60)
BSgenome.Cfamiliaris.UCSC.canFam3.masked (30)
BSgenome.Cjacchus.UCSC.calJac3 (24)
BSgenome.Cjacchus.UCSC.calJac4 (32)
BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (19)
BSgenome.Creinhardtii.JGI.v5.6 (27)
BSgenome.Dmelanogaster.BDGP.Release5 (0)
BSgenome.Dmelanogaster.FlyBase.r51 (1)
BSgenome.Dmelanogaster.UCSC.dm2 (61)
BSgenome.Dmelanogaster.UCSC.dm2.masked (26)
BSgenome.Dmelanogaster.UCSC.dm3 (246)
BSgenome.Dmelanogaster.UCSC.dm3.masked (30)
BSgenome.Dmelanogaster.UCSC.dm6 (213)
BSgenome.Drerio.UCSC.danRer10 (105)
BSgenome.Drerio.UCSC.danRer11 (70)
BSgenome.Drerio.UCSC.danRer5 (38)
BSgenome.Drerio.UCSC.danRer6.masked (26)
BSgenome.Drerio.UCSC.danRer7 (283)
BSgenome.Drerio.UCSC.danRer7.masked (27)
BSgenome.Dvirilis.Ensembl.dvircaf1 (20)
BSgenome.Ecoli.NCBI.20080805 (150)
BSgenome.Gaculeatus.UCSC.gasAcu1 (39)
BSgenome.Gaculeatus.UCSC.gasAcu1.masked (26)
BSgenome.Ggallus.UCSC.galGal3 (68)
BSgenome.Ggallus.UCSC.galGal3.masked (27)
BSgenome.Ggallus.UCSC.galGal4 (37)
BSgenome.Ggallus.UCSC.galGal4.masked (27)
BSgenome.Ggallus.UCSC.galGal5 (27)
BSgenome.Ggallus.UCSC.galGal6 (41)
BSgenome.Hsapiens.1000genomes.hs37d5 (805)
BSgenome.Hsapiens.NCBI.b36v3 (0)
BSgenome.Hsapiens.NCBI.GRCh38 (670)
BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (90)
BSgenome.Hsapiens.UCSC.hg16 (1)
BSgenome.Hsapiens.UCSC.hg17 (54)
BSgenome.Hsapiens.UCSC.hg17.masked (38)
BSgenome.Hsapiens.UCSC.hg18 (267)
BSgenome.Hsapiens.UCSC.hg18.masked (56)
BSgenome.Hsapiens.UCSC.hg19 (2714)
BSgenome.Hsapiens.UCSC.hg19.masked (160)
BSgenome.Hsapiens.UCSC.hg38 (3982)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (29)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (30)
BSgenome.Hsapiens.UCSC.hg38.masked (159)
BSgenome.Hsapiens.UCSC.hs1 (34)
BSgenome.Mdomestica.UCSC.monDom5 (23)
BSgenome.Mfascicularis.NCBI.5.0 (53)
BSgenome.Mfascicularis.NCBI.6.0 (24)
BSgenome.Mfuro.UCSC.musFur1 (29)
BSgenome.Mmulatta.UCSC.rheMac10 (133)
BSgenome.Mmulatta.UCSC.rheMac2 (37)
BSgenome.Mmulatta.UCSC.rheMac2.masked (30)
BSgenome.Mmulatta.UCSC.rheMac3 (34)
BSgenome.Mmulatta.UCSC.rheMac3.masked (32)
BSgenome.Mmulatta.UCSC.rheMac8 (77)
BSgenome.Mmusculus.UCSC.mm10 (1176)
BSgenome.Mmusculus.UCSC.mm10.masked (73)
BSgenome.Mmusculus.UCSC.mm39 (153)
BSgenome.Mmusculus.UCSC.mm6 (0)
BSgenome.Mmusculus.UCSC.mm7 (1)
BSgenome.Mmusculus.UCSC.mm8 (94)
BSgenome.Mmusculus.UCSC.mm8.masked (85)
BSgenome.Mmusculus.UCSC.mm9 (321)
BSgenome.Ppaniscus.UCSC.panPan1 (22)
BSgenome.Ppaniscus.UCSC.panPan2 (28)
BSgenome.Ptroglodytes.UCSC.panTro2 (42)
BSgenome.Ptroglodytes.UCSC.panTro2.masked (28)
BSgenome.Ptroglodytes.UCSC.panTro3 (34)
BSgenome.Ptroglodytes.UCSC.panTro3.masked (25)
BSgenome.Ptroglodytes.UCSC.panTro5 (28)
BSgenome.Ptroglodytes.UCSC.panTro6 (26)
BSgenome.Rnorvegicus.UCSC.rn4 (65)
BSgenome.Rnorvegicus.UCSC.rn4.masked (34)
BSgenome.Rnorvegicus.UCSC.rn5 (97)
BSgenome.Rnorvegicus.UCSC.rn5.masked (40)
BSgenome.Rnorvegicus.UCSC.rn6 (135)
BSgenome.Rnorvegicus.UCSC.rn7 (117)
BSgenome.Scerevisiae.UCSC.sacCer1 (104)
BSgenome.Scerevisiae.UCSC.sacCer2 (197)
BSgenome.Scerevisiae.UCSC.sacCer3 (164)
BSgenome.Sscrofa.UCSC.susScr11 (49)
BSgenome.Sscrofa.UCSC.susScr3 (32)
BSgenome.Sscrofa.UCSC.susScr3.masked (30)
BSgenome.Tgondii.ToxoDB.7.0 (45)
BSgenome.Tguttata.UCSC.taeGut1 (27)
BSgenome.Tguttata.UCSC.taeGut1.masked (26)
BSgenome.Tguttata.UCSC.taeGut2 (26)
BSgenome.Vvinifera.URGI.IGGP12Xv0 (27)
BSgenome.Vvinifera.URGI.IGGP12Xv2 (31)
hta20sttranscriptcluster.db (10)
hta20transcriptcluster.db (57)
huex10sttranscriptcluster.db (55)
HuExExonProbesetLocationHg18 (32)
HuExExonProbesetLocationHg19 (35)
hugene10sttranscriptcluster.db (568)
hugene11sttranscriptcluster.db (86)
hugene20sttranscriptcluster.db (78)
hugene21sttranscriptcluster.db (52)
illuminaHumanDASLBeadID.db (4)
IlluminaHumanMethylation27k.db (49)
IlluminaHumanMethylation27kanno.ilmn12.hg19 (45)
IlluminaHumanMethylation27kmanifest (42)
IlluminaHumanMethylation450k.db (32)
IlluminaHumanMethylation450kanno.ilmn12.hg19 (1483)
IlluminaHumanMethylation450kannotation.ilmn.v1.2 (3)
IlluminaHumanMethylation450kmanifest (1256)
IlluminaHumanMethylation450kprobe (39)
IlluminaHumanMethylationEPICanno.ilm10b2.hg19 (293)
IlluminaHumanMethylationEPICanno.ilm10b3.hg19 (40)
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1194)
IlluminaHumanMethylationEPICmanifest (1133)
IlluminaHumanMethylationEPICv2anno.20a1.hg38 (243)
IlluminaHumanMethylationEPICv2manifest (212)
IlluminaHumanMethylationMSAanno.ilm10a1.hg38 (5)
MafDb.1Kgenomes.phase1.GRCh38 (28)
MafDb.1Kgenomes.phase1.hs37d5 (152)
MafDb.1Kgenomes.phase3.GRCh38 (54)
MafDb.1Kgenomes.phase3.hs37d5 (72)
MafDb.ALL.wgs.phase1.release.v3.20101123 (15)
MafDb.ALL.wgs.phase3.release.v5a.20130502 (10)
MafDb.ALL.wgs.phase3.release.v5b.20130502 (10)
MafDb.ESP6500SI.V2.SSA137 (11)
MafDb.ESP6500SI.V2.SSA137.dbSNP138 (3)
MafDb.ESP6500SI.V2.SSA137.GRCh38 (6)
MafDb.ESP6500SI.V2.SSA137.hs37d5 (6)
MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 (1)
MafDb.ExAC.r0.3.1.snvs.hs37d5 (2)
MafDb.ExAC.r1.0.nonTCGA.GRCh38 (30)
MafDb.ExAC.r1.0.nonTCGA.hs37d5 (27)
MafDb.gnomAD.r2.0.1.GRCh38 (4)
MafDb.gnomAD.r2.0.1.hs37d5 (5)
MafDb.gnomADex.r2.0.1.GRCh38 (3)
MafDb.gnomADex.r2.0.1.hs37d5 (4)
MafDb.gnomADex.r2.1.GRCh38 (24)
MafDb.gnomADex.r2.1.hs37d5 (54)
MafDb.TOPMed.freeze5.hg19 (27)
MafDb.TOPMed.freeze5.hg38 (29)
MafH5.gnomAD.v3.1.1.GRCh38 (4)
MafH5.gnomAD.v3.1.2.GRCh38 (32)
mamurhesusmamuentrezgprobe (0)
Masks.Dmelanogaster.UCSC.dm3 (6)
MeSH.Eco.K12.MG1655.eg.db (15)
MeSH.Eco.O127.H6.E2348.69.eg.db (10)
MeSH.Eco.O157.H7.EDL933.eg.db (10)
MeSH.Eco.O157.H7.Sakai.eg.db (17)
org.MeSH.Eco.K12.MG1655.db (2)
org.MeSH.Eco.O103.H2.12009.db (3)
org.MeSH.Eco.O111.H.11128.db (4)
org.MeSH.Eco.O127.H6.E2348.69.db (3)
org.MeSH.Eco.O157.H7.EC4115.db (3)
org.MeSH.Eco.O157.H7.EDL933.db (4)
org.MeSH.Eco.O157.H7.Sakai.db (3)
org.MeSH.Eco.O157.H7.TW14359.db (3)
org.MeSH.Eco.O26.H11.11368.db (3)
pd.081229.hg18.promoter.medip.hx1 (35)
pd.2006.07.18.hg18.refseq.promoter (38)
pd.2006.07.18.mm8.refseq.promoter (38)
raex10sttranscriptcluster.db (43)
ragene10sttranscriptcluster.db (51)
ragene11sttranscriptcluster.db (52)
ragene20sttranscriptcluster.db (44)
ragene21sttranscriptcluster.db (42)
SNPlocs.Hsapiens.dbSNP.20071016 (3)
SNPlocs.Hsapiens.dbSNP.20080617 (5)
SNPlocs.Hsapiens.dbSNP.20090506 (26)
SNPlocs.Hsapiens.dbSNP.20100427 (28)
SNPlocs.Hsapiens.dbSNP.20101109 (35)
SNPlocs.Hsapiens.dbSNP.20110815 (22)
SNPlocs.Hsapiens.dbSNP.20111119 (30)
SNPlocs.Hsapiens.dbSNP.20120608 (36)
SNPlocs.Hsapiens.dbSNP141.GRCh38 (18)
SNPlocs.Hsapiens.dbSNP142.GRCh37 (18)
SNPlocs.Hsapiens.dbSNP144.GRCh37 (800)
SNPlocs.Hsapiens.dbSNP144.GRCh38 (406)
TxDb.Athaliana.BioMart.plantsmart10 (9)
TxDb.Athaliana.BioMart.plantsmart12 (8)
TxDb.Athaliana.BioMart.plantsmart14 (5)
TxDb.Athaliana.BioMart.plantsmart16 (6)
TxDb.Athaliana.BioMart.plantsmart19 (4)
TxDb.Athaliana.BioMart.plantsmart21 (2)
TxDb.Athaliana.BioMart.plantsmart22 (148)
TxDb.Athaliana.BioMart.plantsmart25 (27)
TxDb.Athaliana.BioMart.plantsmart28 (60)
TxDb.Athaliana.BioMart.plantsmart51 (34)
TxDb.Celegans.UCSC.ce11.ensGene (103)
TxDb.Celegans.UCSC.ce11.refGene (49)
TxDb.Celegans.UCSC.ce6.ensGene (271)
TxDb.Cfamiliaris.UCSC.canFam3.refGene (27)
TxDb.Cfamiliaris.UCSC.canFam4.refGene (19)
TxDb.Cfamiliaris.UCSC.canFam5.refGene (18)
TxDb.Cfamiliaris.UCSC.canFam6.refGene (16)
TxDb.Dmelanogaster.UCSC.dm3.ensGene (530)
TxDb.Dmelanogaster.UCSC.dm6.ensGene (237)
TxDb.Drerio.UCSC.danRer10.refGene (73)
TxDb.Drerio.UCSC.danRer11.refGene (37)
TxDb.Ggallus.UCSC.galGal4.refGene (26)
TxDb.Ggallus.UCSC.galGal5.refGene (45)
TxDb.Ggallus.UCSC.galGal6.refGene (27)
TxDb.Hsapiens.BioMart.igis (28)
TxDb.Hsapiens.UCSC.hg18.knownGene (547)
TxDb.Hsapiens.UCSC.hg19.knownGene (4740)
TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts (119)
TxDb.Hsapiens.UCSC.hg38.knownGene (2480)
TxDb.Hsapiens.UCSC.hg38.refGene (88)
TxDb.Mmulatta.UCSC.rheMac8.refGene (26)
TxDb.Mmusculus.UCSC.mm10.ensGene (130)
TxDb.Mmusculus.UCSC.mm10.knownGene (1354)
TxDb.Mmusculus.UCSC.mm39.knownGene (134)
TxDb.Mmusculus.UCSC.mm39.refGene (114)
TxDb.Mmusculus.UCSC.mm9.knownGene (593)
TxDb.Ptroglodytes.UCSC.panTro4.refGene (25)
TxDb.Ptroglodytes.UCSC.panTro5.refGene (20)
TxDb.Ptroglodytes.UCSC.panTro6.refGene (21)
TxDb.Rnorvegicus.BioMart.igis (28)
TxDb.Rnorvegicus.UCSC.rn4.ensGene (275)
TxDb.Rnorvegicus.UCSC.rn5.refGene (114)
TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq (20)
TxDb.Rnorvegicus.UCSC.rn6.refGene (134)
TxDb.Rnorvegicus.UCSC.rn7.refGene (109)
TxDb.Scerevisiae.UCSC.sacCer2.ensGene (0)
TxDb.Scerevisiae.UCSC.sacCer2.sgdGene (36)
TxDb.Scerevisiae.UCSC.sacCer3.sgdGene (90)