See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages

Download stats for Bioconductor annotation packages

This page was generated on 2023-11-17 21:56:58 -0500 (Fri, 17 Nov 2023).

The number reported next to each package name is the download score, that is, the average number of distinct IPs that “hit” the package each month for the last 12 months (not counting the current month).

Top 30

1	GenomeInfoDbData (48182)
2	GO.db (18924)
3	org.Hs.eg.db (15744)
4	HDO.db (10857)
5	org.Mm.eg.db (6738)
6	TxDb.Hsapiens.UCSC.hg19.knownGene (4436)
7	DO.db (3493)
8	BSgenome.Hsapiens.UCSC.hg38 (2958)
9	BSgenome.Hsapiens.UCSC.hg19 (2719)
10	reactome.db (2612)

11	TxDb.Hsapiens.UCSC.hg38.knownGene (2283)
12	EnsDb.Hsapiens.v86 (2015)
13	hgu133plus2.db (1442)
14	TxDb.Mmusculus.UCSC.mm10.knownGene (1313)
15	org.Rn.eg.db (1249)
16	IlluminaHumanMethylation450kanno.ilmn12.hg19 (1193)
17	FDb.InfiniumMethylation.hg19 (1187)
18	BSgenome.Mmusculus.UCSC.mm10 (1100)
19	IlluminaHumanMethylation450kmanifest (1028)
20	IlluminaHumanMethylationEPICmanifest (955)

21	IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (950)
22	Homo.sapiens (893)
23	org.Dm.eg.db (775)
24	JASPAR2020 (760)
25	hgu133plus2cdf (737)
26	PFAM.db (734)
27	hgu95av2.db (709)
28	hgu133a.db (705)
29	EnsDb.Hsapiens.v75 (673)
30	EnsDb.Mmusculus.v79 (635)

All annotation packages

All annotation package stats in one file: annotation_pkg_stats.tab

All annotation package download scores in one file: annotation_pkg_scores.tab

See Download stats for Bioconductor annotation repository (all packages combined)

A

	ABAData (1)
	abc (1)
	abind (1)
	acepack (1)
	actuar (1)
	adabag (1)
	ade4 (2)
	adegenet (1)
	adegraphics (1)
	adephylo (1)
	ADGofTest (1)
	adme16cod (1)
	adme16cod.db (21)
	admiral (1)
	admiral.test (1)
	admiraldev (1)
	admisc (24)
	ADMM (1)
	AER (1)
	afex (1)
	affxparser (1)
	affy (1)
	affycoretools (1)
	affyio (1)
	affyPLM (1)
	ag (1)
	ag.db (18)
	agahomology (1)
	agcdf (17)
	AGHmatrix (1)
	AgiMicroRna (0)
	agprobe (16)
	agricolae (4)
	AHCytoBands (15)
	AHEnsDbs (19)
	AHLRBaseDbs (19)
	AHMeSHDbs (24)
	AHPathbankDbs (17)
	AHPubMedDbs (22)
	AHWikipathwaysDbs (15)
	AICcmodavg (1)
	AIPW (1)
	airr (0)
	airway (1)
	akima (1)
	alabama (1)
	alakazam (0)
	ald (1)
	ALDEx2 (1)
	aldvmm (1)
	alembic (1)
	AlgDesign (1)
	alkahest.generic (1)
	ALL (8)
	alluvial (1)
	almanac (1)
	alphahull (1)
	AlphaMissense.v2023.hg19 (1)
	AlphaMissense.v2023.hg38 (1)
	alphashape3d (1)
	alr4 (1)
	alternativeSplicingEvents.hg19 (17)
	alternativeSplicingEvents.hg38 (19)
	amap (1)
	AMARETTO (1)
	ambient (1)
	Amelia (1)

	AmesHousing (1)
	amgen.okta.client (0)
	ANCOMBC (1)
	animation (1)
	annaffy (0)
	anndata (1)
	annotate (2)
	AnnotationDbi (12)
	AnnotationFilter (1)
	AnnotationForge (1)
	AnnotationHub (2)
	annotatr (1)
	anopheles.db0 (15)
	anRichment (1)
	anticlust (1)
	AnVIL (1)
	anytime (3)
	aod (1)
	apcluster (1)
	ape (12)
	apeglm (1)
	apexcharter (1)
	aplot (17)
	aqp (1)
	arabidopsis.db0 (23)
	archive (1)
	ArchR (1)
	argparse (7)
	argus.DS.Credentials (1)
	argusDS.apc.utils (1)
	argusDS.backtesting.engine (1)
	argusDS.data (1)
	argusDS.data.preparation (1)
	argusDS.data.preparation2 (1)
	argusDS.DB.manager.utilities (1)
	argusDS.driver.importance (1)
	argusDS.FCUtilities (1)
	argusDS.FZ.SourceData (1)
	argusDS.gamlss.forecast (1)
	argusDS.gamlss.modelling (1)
	argusDS.gamlss.testing (1)
	argusDS.gamlss.utils (1)
	argusDS.model.tools (1)
	argusDS.PossibilityCurves.utils (0)
	argusDS.shiny.utils (1)
	argusDS.spread.trading.utils (1)
	argusDS.Studio.APC (1)
	argusDS.Studio.FC (1)
	argusDS.Studio.MyStudio (1)
	argusDS.Studio.permissions (1)
	argusDS.Studio.utils (1)
	argusDS.trading.performance (1)
	argusDS.TradingSignals (0)
	argusDS.utilities (1)
	arm (1)
	aroma.affymetrix (6)
	aroma.apd (6)
	aroma.core (6)
	arrayhelpers (1)
	arrayop (1)
	arrow (11)
	arsenal (1)
	arules (21)
	ArvadosR (1)
	ascii (1)
	asciicast (1)
	ASExtras4 (1)

	ash (4)
	ashr (2)
	asht (1)
	AsioHeaders (3)
	askpass (42)
	asremlPlus (1)
	assert (1)
	assertive.code (1)
	assertive.properties (2)
	assertive.types (2)
	assertr (1)
	assertthat (1)
	ASSET (1)
	AssotesteR (1)
	ATACseqQC (1)
	ATE (0)
	atgenomeatrefseq (1)
	atgenomeatrefseq7cdf (1)
	atgenomeatrefseq7probe (1)
	atgenomeatrefseqcdf (1)
	atgenomeatrefseqprobe (1)
	atgenomeattair (1)
	atgenomeattaircdf (1)
	atgenomeattairprobe (1)
	atgenomeattigr (1)
	atgenomeattigr7cdf (1)
	atgenomeattigr7probe (1)
	atgenomeattigrcdf (1)
	atgenomeattigrprobe (1)
	ath1121501 (1)
	ath1121501.db (48)
	ath1121501cdf (45)
	ath1121501probe (18)
	ath1atrefseq (1)
	ath1atrefseq7cdf (1)
	ath1atrefseq7probe (1)
	ath1atrefseqcdf (1)
	ath1atrefseqprobe (1)
	ath1attair (1)
	ath1attaircdf (1)
	ath1attairprobe (1)
	ath1attigr (1)
	ath1attigr7cdf (1)
	ath1attigr7probe (1)
	ath1attigrcdf (1)
	ath1attigrprobe (1)
	athhomology (1)
	ATR (1)
	attachment (1)
	attempt (1)
	AUC (1)
	AUCell (1)
	audio (1)
	av (1)
	ava2 (1)
	aws (1)
	aws.ec2metadata (1)
	aws.s3 (4)
	aws.signature (4)
	azcore (1)
	Azimuth (1)
	AzureAuth (1)
	AzureGraph (1)
	AzureRMR (1)
	AzureStor (1)

B

	babelgene (2)
	babelmixr2 (1)
	babelwhale (1)
	babynames (1)
	backbone (1)
	backports (74)
	badger (1)
	baguette (1)
	bain (1)
	BalancedSampling (1)
	ballgown (0)
	bambu (1)
	BANDITS (0)
	barley1cdf (14)
	barley1probe (15)
	BART (1)
	bartMachine (1)
	bartMachineJARs (1)
	base (0)
	base64 (1)
	base64enc (1)
	base64url (1)
	basefun (1)
	BASiCS (1)
	basilisk (1)
	basilisk.utils (1)
	batchelor (1)
	BatchJobs (1)
	batchtools (1)
	BayesFactor (1)
	BayesFM (1)
	bayesm (3)
	bayesmeta (1)
	bayesplot (8)
	bayesQR (1)
	bayestestR (1)
	BayesX (1)
	baySeq (4)
	BB (1)
	BBmisc (1)
	bbmle (1)
	bbr (1)
	bbr.bayes (1)
	bcellViper (1)
	bdsmatrix (1)
	beachmat (2)
	beadarray (1)
	beanplot (1)
	beepr (1)
	beeswarm (1)
	bench (1)
	benchmarkme (1)
	benchmarkmeData (1)
	benchr (1)
	berryFunctions (1)
	Bessel (1)
	bestNormalize (1)
	betareg (1)
	bezier (1)
	BGLR (1)
	BH (84)
	BiasedUrn (9)
	bibtex (1)
	biclust (1)
	bife (1)
	biganalytics (1)
	bigassertr (1)
	bigD (1)
	bigdist (1)
	biglasso (1)
	biglm (1)
	biglmm (1)
	bigmemory (1)
	bigmemory.sri (1)
	bigparallelr (1)
	bigreadr (1)
	bigrquery (9)
	bigsnpr (1)
	bigsparser (1)
	bigstatsr (1)
	bigutils (1)
	bigutilsr (1)
	billboarder (2)
	bindr (1)
	bindrcpp (1)
	binGroup (1)
	binom (1)
	binr (0)
	bio3d (1)
	biobank (1)
	BioBase (0)
	Biobase (4)
	bioc::GenomeInfoDbData (1)
	BiocBaseUtils (1)
	BiocCheck (1)
	BiocFileCache (2)
	BiocGenerics (16)
	BiocInstaller (0)
	BiocIO (1)
	BiocManager (123)
	BiocNeighbors (1)
	Bioconductor (1)
	bioconductor (1)
	BiocParallel (14)
	BiocSingular (1)
	BiocSklearn (0)
	BiocStyle (1)
	BiocVersion (26)
	biocViews (1)
	BiocWorkflowTools (0)
	BioGenerics (1)
	Biogenerics (1)

	biomaRt (2)
	BioMartGOGeneSets (4)
	biomartr (1)
	biomformat (1)
	biostatR (1)
	biostatUtil (0)
	Biostrings (11)
	BioVersion (1)
	biovizBase (1)
	bit (35)
	bit64 (8)
	bitops (7)
	bizdays (1)
	BlakerCI (1)
	blastula (1)
	blavaan (1)
	blme (5)
	blob (84)
	blockcluster (1)
	blockmodeling (1)
	blogdown (1)
	bluster (1)
	BMA (1)
	BMisc (1)
	bmp (1)
	bnlearn (1)
	BOIN (1)
	bold (1)
	bookdown (23)
	boot (32)
	bootstrap (1)
	botor (1)
	bovine.db (18)
	bovine.db0 (15)
	bovinecdf (16)
	bovineprobe (15)
	box (5)
	bpcp (1)
	BradleyTerry2 (1)
	brave (1)
	brew (61)
	brglm (1)
	brglm2 (1)
	bricks (1)
	brickster (1)
	bridgesampling (1)
	brio (2)
	brms (1)
	brmsmargins (1)
	Brobdingnag (1)
	broman (1)
	broom (88)
	broom.helpers (3)
	broom.mixed (1)
	BrowserViz (1)
	bs4Dash (5)
	BSgenome (1)
	BSGenome (1)
	BSgenome.Alyrata.JGI.v1 (15)
	BSgenome.Amellifera.BeeBase.assembly4 (19)
	BSgenome.Amellifera.NCBI.AmelHAv3.1 (17)
	BSgenome.Amellifera.UCSC.apiMel2 (16)
	BSgenome.Amellifera.UCSC.apiMel2.masked (15)
	BSgenome.Aofficinalis.NCBI.V1 (15)
	BSgenome.Athaliana.TAIR.01222004 (1)
	BSgenome.Athaliana.TAIR.04232008 (20)
	BSgenome.Athaliana.TAIR.TAIR9 (67)
	BSgenome.Btaurus.UCSC.bosTau3 (17)
	BSgenome.Btaurus.UCSC.bosTau3.masked (15)
	BSgenome.Btaurus.UCSC.bosTau4 (16)
	BSgenome.Btaurus.UCSC.bosTau4.masked (15)
	BSgenome.Btaurus.UCSC.bosTau6 (32)
	BSgenome.Btaurus.UCSC.bosTau6.masked (32)
	BSgenome.Btaurus.UCSC.bosTau8 (20)
	BSgenome.Btaurus.UCSC.bosTau9 (24)
	BSgenome.Btaurus.UCSC.bosTau9.masked (17)
	BSgenome.Carietinum.NCBI.v1 (15)
	BSgenome.Celegans.UCSC.ce10 (49)
	BSgenome.Celegans.UCSC.ce11 (106)
	BSgenome.Celegans.UCSC.ce2 (277)
	BSgenome.Celegans.UCSC.ce6 (19)
	BSgenome.Cfamiliaris.UCSC.canFam2 (18)
	BSgenome.Cfamiliaris.UCSC.canFam2.masked (15)
	BSgenome.Cfamiliaris.UCSC.canFam3 (126)
	BSgenome.Cfamiliaris.UCSC.canFam3.masked (17)
	BSgenome.Cjacchus.UCSC.calJac3 (16)
	BSgenome.Cjacchus.UCSC.calJac4 (15)
	BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (15)
	BSgenome.Creinhardtii.JGI.v5.6 (13)
	BSgenome.Dmelanogaster.BDGP.Release5 (1)
	BSgenome.Dmelanogaster.FlyBase.r51 (1)
	BSgenome.Dmelanogaster.UCSC.dm2 (30)
	BSgenome.Dmelanogaster.UCSC.dm2.masked (17)
	BSgenome.Dmelanogaster.UCSC.dm3 (187)
	BSgenome.Dmelanogaster.UCSC.dm3.masked (17)
	BSgenome.Dmelanogaster.UCSC.dm6 (125)
	BSgenome.Drerio.UCSC.danRer10 (82)
	BSgenome.Drerio.UCSC.danRer11 (56)
	BSgenome.Drerio.UCSC.danRer5 (15)
	BSgenome.Drerio.UCSC.danRer5.masked (14)
	BSgenome.Drerio.UCSC.danRer6 (15)
	bsgenome.drerio.ucsc.danrer6 (0)
	BSgenome.Drerio.UCSC.danRer6.masked (14)
	BSgenome.Drerio.UCSC.danRer7 (93)
	BSgenome.Drerio.UCSC.danRer7.masked (15)
	BSgenome.Dvirilis.Ensembl.dvircaf1 (13)
	BSgenome.Ecoli.NCBI.20080805 (151)
	BSgenome.Gaculeatus.UCSC.gasAcu1 (16)
	BSgenome.Gaculeatus.UCSC.gasAcu1.masked (15)
	BSgenome.Gasterosteus.UCSC.gasAcu1 (0)
	BSgenome.Ggallus.ENSEMBL.galGal6 (1)
	BSgenome.Ggallus.UCSC.galGal3 (42)

	bsgenome.ggallus.ucsc.galgal3 (0)
	BSgenome.Ggallus.UCSC.galGal3.masked (16)
	BSgenome.Ggallus.UCSC.galGal4 (20)
	BSgenome.Ggallus.UCSC.galGal4.masked (14)
	BSgenome.Ggallus.UCSC.galGal5 (16)
	BSgenome.Ggallus.UCSC.galGal6 (28)
	BSgenome.Gmax.NCBI.Gmv40 (15)
	BSgenome.Hsapiens.1000genomes.hs37d5 (552)
	BSgenome.Hsapiens.1000genomes.hs38d5 (1)
	BSgenome.Hsapiens.1000genomes.hs3d5 (1)
	BSgenome.Hsapiens.NCBI.b36v3 (1)
	BSgenome.Hsapiens.NCBI.GRCh38 (572)
	BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (30)
	BSgenome.Hsapiens.UCSC.hg1 (0)
	BSgenome.Hsapiens.UCSC.hg16 (1)
	BSgenome.Hsapiens.UCSC.hg17 (17)
	BSgenome.Hsapiens.UCSC.hg17.masked (16)
	BSgenome.Hsapiens.UCSC.hg18 (155)
	BSgenome.Hsapiens.UCSC.hg18.masked (46)
	BSgenome.Hsapiens.UCSC.hg19 (2719)
	bsgenome.hsapiens.ucsc.hg19 (1)
	BSgenome.Hsapiens.UCSC.hg19.masked (125)
	BSgenome.Hsapiens.UCSC.hg38 (2958)
	BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (21)
	BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (21)
	BSgenome.Hsapiens.UCSC.hg38.masked (137)
	BSgenome.Hsapiens.UCSC.hs1 (16)
	BSgenome.Hsapiens.UCSC.mm10 (0)
	BSgenome.Mdomestica.UCSC.monDom5 (15)
	BSgenome.Mfascicularis.NCBI.5.0 (21)
	BSgenome.Mfascicularis.NCBI.6.0 (17)
	BSgenome.Mfuro.UCSC.musFur1 (14)
	BSgenome.Mmul10.SIVmac251 (1)
	BSgenome.Mmulatta.NCBI.mmul10.tmp (1)
	BSgenome.Mmulatta.UCSC.rheMac10 (45)
	BSgenome.Mmulatta.UCSC.rheMac2 (18)
	bsgenome.mmulatta.ucsc.rhemac2 (0)
	BSgenome.Mmulatta.UCSC.rheMac2.masked (15)
	BSgenome.Mmulatta.UCSC.rheMac3 (16)
	BSgenome.Mmulatta.UCSC.rheMac3.masked (15)
	BSgenome.Mmulatta.UCSC.rheMac8 (16)
	BSgenome.Mmusculus.UCSC.hg38 (1)
	BSgenome.Mmusculus.UCSC.mm10 (1100)
	Bsgenome.Mmusculus.UCSC.mm10 (1)
	BSgenome.Mmusculus.UCSC.mm10.masked (58)
	BSgenome.Mmusculus.UCSC.mm39 (86)
	BSgenome.Mmusculus.UCSC.mm6 (1)
	BSgenome.Mmusculus.UCSC.mm7 (1)
	BSgenome.Mmusculus.UCSC.mm8 (31)
	BSgenome.Mmusculus.UCSC.mm8.masked (30)
	BSgenome.Mmusculus.UCSC.mm9 (252)
	BSgenome.Mmusculus.UCSC.mm9.masked (37)
	BSgenome.Omela.CUSTOM.oenMel1.1 (1)
	BSgenome.Osativa.MSU.MSU7 (27)
	BSgenome.Ppaniscus.UCSC.panPan1 (15)
	BSgenome.Ppaniscus.UCSC.panPan2 (15)
	BSgenome.Ptroglodytes.UCSC.panTro2 (14)
	BSgenome.Ptroglodytes.UCSC.panTro2.masked (13)
	BSgenome.Ptroglodytes.UCSC.panTro3 (17)
	BSgenome.Ptroglodytes.UCSC.panTro3.masked (14)
	BSgenome.Ptroglodytes.UCSC.panTro5 (16)
	BSgenome.Ptroglodytes.UCSC.panTro6 (15)
	BSgenome.Rnorvegicus.UCSC.rn4 (27)
	BSgenome.Rnorvegicus.UCSC.rn4.masked (13)
	BSgenome.Rnorvegicus.UCSC.rn5 (86)
	BSgenome.Rnorvegicus.UCSC.rn5.masked (32)
	BSgenome.Rnorvegicus.UCSC.rn6 (74)
	BSgenome.Rnorvegicus.UCSC.rn7 (51)
	BSgenome.Scerevisiae.UCSC.sacCer1 (88)
	BSgenome.Scerevisiae.UCSC.sacCer2 (172)
	BSgenome.Scerevisiae.UCSC.sacCer3 (187)
	BSgenome.Sscrofa.UCSC.susScr11 (30)
	BSgenome.Sscrofa.UCSC.susScr3 (15)
	BSgenome.Sscrofa.UCSC.susScr3.masked (13)
	BSgenome.Tgondii.ToxoDB.7.0 (19)
	BSgenome.Tguttata.UCSC.taeGut1 (14)
	BSgenome.Tguttata.UCSC.taeGut1.masked (12)
	BSgenome.Tguttata.UCSC.taeGut2 (15)
	BSgenome.Vvinifera.URGI.IGGP12Xv0 (14)
	BSgenome.Vvinifera.URGI.IGGP12Xv2 (14)
	BSgenome.Vvinifera.URGI.IGGP8X (13)
	BSgenomes (1)
	bsicons (1)
	bslib (113)
	bsplus (1)
	bsubtiliscdf (13)
	bsubtilisprobe (14)
	btahomology (1)
	btbovinebtense (1)
	btbovinebtensecdf (1)
	btbovinebtenseprobe (1)
	btbovinebtensg (1)
	btbovinebtensgcdf (1)
	btbovinebtensgprobe (1)
	btbovinebtenst (1)
	btbovinebtenstcdf (1)
	btbovinebtenstprobe (1)
	btbovinebtentrezg (1)
	btbovinebtentrezgcdf (1)
	btbovinebtentrezgprobe (1)
	btbovinebtrefseq (1)
	btbovinebtrefseqcdf (1)
	btbovinebtrefseqprobe (1)
	btbovinebtug (1)
	btbovinebtugcdf (1)
	btbovinebtugprobe (1)
	btergm (1)
	bumphunter (0)
	butcher (1)
	bvls (1)
	BWStest (1)

C

	C50 (1)
	ca (3)
	cache (1)
	cachem (112)
	cadd.v1.6.hg19 (0)
	cadd.v1.6.hg38 (0)
	cAIC4 (1)
	Cairo (12)
	callr (77)
	callthat (1)
	CAM (1)
	CAMERA (0)
	campsis (1)
	campsismod (1)
	CancerSubtypes (0)
	candisc (1)
	canine.db (17)
	canine.db0 (13)
	canine2 (1)
	canine2.db (17)
	canine2cdf (15)
	canine2probe (16)
	caninecdf (13)
	canineprobe (15)
	canvasXpress (0)
	car (56)
	carData (2)
	caret (50)
	carrier (1)
	casebase (1)
	castor (1)
	CATALYST (1)
	catdata (1)
	Category (1)
	caTools (2)
	CATT (1)
	causaldata (1)
	cba (1)
	CBPS (1)
	ccaPP (1)
	ccdata (7)
	ccdrAlgorithm (1)
	cdip.datastore (1)
	celda (1)
	celegans (1)
	celegans.db (27)
	celeganscdf (15)
	CelegansGenome.ce2 (1)
	celegansprobe (15)
	celhomology (1)
	celldex (1)
	CellMixS (0)
	cellranger (1)
	cem (0)
	CEMiTool (0)
	censReg (1)
	CeTF (1)
	cfahomology (1)
	cfcanine2cfense (1)
	cfcanine2cfense7cdf (1)
	cfcanine2cfense7probe (1)
	cfcanine2cfensecdf (1)
	cfcanine2cfenseprobe (1)
	cfcanine2cfensg (1)
	cfcanine2cfensg7cdf (1)
	cfcanine2cfensg7probe (1)
	cfcanine2cfensgcdf (1)
	cfcanine2cfensgprobe (1)
	cfcanine2cfenst (1)
	cfcanine2cfenst7cdf (1)
	cfcanine2cfenst7probe (1)
	cfcanine2cfenstcdf (1)
	cfcanine2cfenstprobe (1)
	cfcanine2cfentrezg (1)
	cfcanine2cfentrezg7cdf (1)
	cfcanine2cfentrezg7probe (1)
	cfcanine2cfentrezgcdf (1)
	cfcanine2cfentrezgprobe (1)
	cfcanine2cfrefseq (1)
	cfcanine2cfrefseq7cdf (1)
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	mm430a2mmrefseqprobe (1)
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	mm430a2mmvegae (1)
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	mm430ammrefseqcdf (1)
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	mm430bmmensgcdf (1)
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	mm430bmmenst (1)
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	mm430bmmentrezg (1)
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	mm74av1mmenst (1)
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	mm74av1mmenstcdf (1)

	mm74av1mmenstprobe (1)
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	mm74av2mmenst (1)
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	mm74av2mmentrezg (1)
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	mm74av2mmrefseq (1)
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	mm74av2mmrefseqcdf (1)
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	MmAgilentDesign026655.db (21)
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	mouse4302.db (164)
	mouse4302cdf (100)
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	mouse4302probe (16)
	mouse430a2 (1)
	mouse430a2.db (53)
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	MPO.db (383)
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	mu11ksuba.db (16)
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	mu11ksubb (1)
	mu11ksubb.db (16)
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	mu11ksubbprobe (14)
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	Mu15v1.db (14)
	mu19ksuba (1)
	mu19ksuba.db (17)
	mu19ksubacdf (13)
	mu19ksubb (1)
	mu19ksubb.db (15)
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	mu19ksubc.db (15)
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	mvtnorm (32)
	mwgcod (1)
	mwgcod.db (15)
	myphd (1)
	mzID (0)
	mzR (1)

N

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	N2R (0)
	nabor (1)
	NADA (4)
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	ndexr (0)
	ndjson (0)
	Nebulosa (1)
	NEONiso (1)
	nestedLogit (1)
	nestedmodels (1)

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	nlme (118)
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	nloptr (54)
	NMcalc (1)
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	NMF (7)
	NMproject (0)
	nmrec (1)
	NMsim (1)

	nnet (68)
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	Norway981.db (15)
	Nozzle.R1 (1)
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	npsurv (1)
	nugohs1a520180.db (15)
	nugohs1a520180cdf (13)
	nugohs1a520180probe (13)
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	nugomm1a520177probe (12)
	numbat (4)
	numbers (1)
	numDeriv (1)
	nycflights13 (1)

O

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	odbc (9)
	odyproteomicsValidator (1)
	officedown (1)
	officer (9)
	oligo (1)
	oligoClasses (0)
	oligoData (52)
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	openssl (191)
	openxlsx (19)
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	OperonHumanV3.db (13)
	optextras (1)
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	optimx (9)
	optmatch (1)
	optparse (51)
	optpart (1)
	optweight (1)
	ordinal (1)
	org.Ag.eg.db (107)
	org.At.eg.db (0)
	org.At.tair.db (584)
	org.Bt.eg.db (288)
	org.Ce.eg.db (334)
	org.Cf.eg.db (237)
	org.Dm.eg.db (775)
	org.Dr.eg.db (570)
	org.EcK12.eg.db (171)
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	org.Gg.eg.db (283)
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	org.Hs.eg.db (15744)
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	org.Hs.pep.db (1)
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	org.Hsa.eg.db (1)
	org.hsa.eg.db (1)
	org.HsMm.ortholog.db (1)
	org.MeSH.Aca.db (1)
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	org.MeSH.Bsu.TUB10.db (1)
	org.MeSH.Bsu.W23.db (1)

	org.MeSH.Bta.db (1)
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	org.MeSH.Eco.O103.H2.12009.db (1)
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	org.MeSH.Eco.O127.H6.E2348.69.db (1)
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	org.MeSH.Eco.O157.H7.Sakai.db (1)
	org.MeSH.Eco.O157.H7.TW14359.db (1)
	org.MeSH.Eco.O26.H11.11368.db (1)
	org.MeSH.Eco.O26.H7.CB9615.db (1)
	org.MeSH.Eco.S88.db (1)
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	org.MeSH.Eco.UMN026.db (1)
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	org.MeSH.Eqc.db (1)
	org.MeSH.Gga.db (1)
	org.MeSH.Gma.db (1)
	org.MeSH.Hsa.db (1)
	org.MeSH.Laf.db (1)
	org.MeSH.Lma.db (1)
	org.MeSH.Mdo.db (1)
	org.MeSH.Mes.db (1)
	org.MeSH.Mga.db (1)
	org.MeSH.Miy.db (1)
	org.MeSH.Mml.db (1)
	org.MeSH.Mmu.db (1)
	org.MeSH.Mtr.db (1)
	org.MeSH.Nle.db (1)
	org.MeSH.Oan.db (1)
	org.MeSH.Ocu.db (1)
	org.MeSH.Oni.db (1)
	org.MeSH.Osa.db (1)
	org.MeSH.Pab.db (1)
	org.MeSH.Pae.LESB58.db (1)
	org.MeSH.Pae.PA14.db (1)
	org.MeSH.Pae.PA7.db (1)
	org.MeSH.Pae.PAO1.db (1)
	org.MeSH.Pfa.3D7.db (1)
	org.MeSH.Pto.db (1)

	org.MeSH.Ptr.db (1)
	org.MeSH.Rno.db (1)
	org.MeSH.Sau.COL.db (1)
	org.MeSH.Sau.ED98.db (1)
	org.MeSH.Sau.M013.db (1)
	org.MeSH.Sau.MRSA252.db (1)
	org.MeSH.Sau.MSHR1132.db (1)
	org.MeSH.Sau.MSSA476.db (1)
	org.MeSH.Sau.Mu3.db (1)
	org.MeSH.Sau.Mu50.db (1)
	org.MeSH.Sau.MW2.db (1)
	org.MeSH.Sau.N315.db (1)
	org.MeSH.Sau.Newman.db (1)
	org.MeSH.Sau.RF122.db (1)
	org.MeSH.Sau.USA300FPR3757.db (1)
	org.MeSH.Sau.USA300TCH1516.db (1)
	org.MeSH.Sau.VC40.db (1)
	org.MeSH.Sce.S288c.db (1)
	org.MeSH.Sco.A32.db (1)
	org.MeSH.Sil.db (1)
	org.MeSH.Spo.972h.db (1)
	org.MeSH.Spu.db (1)
	org.MeSH.Ssc.db (1)
	org.MeSH.Syn.db (1)
	org.MeSH.Tbr.9274.db (1)
	org.MeSH.Tgo.ME49.db (1)
	org.MeSH.Tgu.db (1)
	org.MeSH.Vvi.db (1)
	org.MeSH.Xla.db (1)
	org.MeSH.Xtr.db (1)
	org.MeSH.Zma.db (1)
	org.Miy.MeSH.db (0)
	org.Mm.cross.db (1)
	org.Mm.eg.db (6738)
	org.mm.eg.db (1)
	org.Mm.ipi.db (1)
	org.Mm.ref.db (1)
	org.Mm.sp.db (1)
	org.Mmu.eg.db (269)
	org.Mxanthus.db (25)
	org.Pf.plasmo.db (36)
	org.Pt.eg.db (111)
	org.Rn.cross.db (1)
	org.Rn.eg.db (1249)
	org.Rn.ipi.db (1)
	org.Rn.ref.db (1)
	org.Rn.sp.db (1)
	org.Sc.sgd.db (481)
	org.Sco.eg.db (2)
	org.Ss.eg.db (268)
	org.Tgondii.eg.db (1)
	org.Xl.eg.db (155)
	OrganismDbi (0)
	orientlib (1)
	origami (1)
	orthogene (1)
	Orthology.eg.db (65)
	orthopolynom (1)
	osahomology (1)
	oskeyring (1)
	osmdata (31)
	osprey (1)
	osqp (1)
	osriceosrefseq (1)
	osriceosrefseq7cdf (1)
	osriceosrefseq7probe (1)
	osriceosrefseqcdf (1)
	osriceosrefseqprobe (1)
	osriceostigr (1)
	osriceostigr7cdf (1)
	osriceostigr7probe (1)
	osriceostigrcdf (1)
	osriceostigrprobe (1)
	overlapping (1)

P

	p (0)
	packer (1)
	packrat (28)
	pacman (1)
	padr (1)
	paeg1acdf (11)
	paeg1aprobe (12)
	pagedown (1)
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	PairedData (1)
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	pammtools (1)
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	pan (1)
	pander (2)
	panelr (1)
	PANTHER.db (93)
	paradox (1)
	parallel (0)
	parallelly (76)
	parallelMap (1)
	parameters (2)
	ParamHelpers (0)
	parsedate (2)
	parsnip (8)
	PartheenMetaData (1)
	PartheenMetaData.db (13)
	partitions (1)
	party (1)
	partykit (2)
	PASWR (1)
	patchwork (33)
	pathfindR.data (1)
	pathview (1)
	patrick (1)
	paws (13)
	paws.analytics (13)
	paws.application.integration (14)
	paws.common (15)
	paws.compute (14)
	paws.cost.management (13)
	paws.customer.engagement (13)
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	paws.developer.tools (7)
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	paws.machine.learning (13)
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	paws.networking (13)
	paws.security.identity (13)
	paws.storage (13)
	pbapply (38)
	pbdZMQ (1)
	PBIR (1)
	pbivnorm (1)
	pbkrest (1)
	pbkrtest (65)
	pbmcapply (1)
	PBSmapping (1)
	pcaExplorer (1)
	pcalg (1)
	pcaMethods (1)
	pcaPP (8)
	PCAtools (1)
	PCDimension (1)
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	pcse (1)
	pd.081229.hg18.promoter.medip.hx1 (19)
	pd.2006.07.18.hg18.refseq.promoter (23)
	pd.2006.07.18.mm8.refseq.promoter (18)
	pd.2006.10.31.rn34.refseq.promoter (20)
	pd.ag (20)
	pd.aragene.1.0.st (21)
	pd.aragene.1.1.st (20)
	pd.ath1.121501 (22)
	pd.barley1 (19)
	pd.bovgene.1.0.st (19)
	pd.bovgene.1.1.st (19)
	pd.bovine (19)
	pd.bsubtilis (19)
	pd.cangene.1.0.st (19)
	pd.cangene.1.1.st (18)
	pd.canine (18)
	pd.canine.2 (18)
	pd.celegans (18)
	pd.charm.hg18.example (21)
	pd.chicken (20)
	pd.chigene.1.0.st (20)
	pd.chigene.1.1.st (21)
	pd.chogene.2.0.st (18)
	pd.chogene.2.1.st (20)
	pd.citrus (18)
	pd.clariom.d.human (60)
	pd.clariom.s.human (68)
	pd.clariom.s.human.ht (29)
	pd.clariom.s.mouse (44)
	pd.clariom.s.mouse.ht (22)
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	pd.clariom.s.rat.ht (20)
	pd.cotton (21)
	pd.cyngene.1.0.st (19)
	pd.cyngene.1.1.st (19)
	pd.cyrgene.1.0.st (20)
	pd.cyrgene.1.1.st (18)
	pd.cytogenetics.array (19)
	pd.drogene.1.0.st (18)
	pd.drogene.1.1.st (18)
	pd.drosgenome1 (18)
	pd.drosophila.2 (19)
	pd.e.coli.2 (22)
	pd.ecoli (19)
	pd.ecoli.asv2 (19)
	pd.elegene.1.0.st (19)
	pd.elegene.1.1.st (18)
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	pd.equgene.1.1.st (18)
	pd.feinberg.hg18.me.hx1 (18)
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	pd.felgene.1.0.st (19)
	pd.felgene.1.1.st (19)
	pd.fingene.1.0.st (20)
	pd.fingene.1.1.st (19)
	pd.genomewidesnp.5 (57)
	pd.genomewidesnp.6 (71)
	pd.guigene.1.0.st (19)
	pd.guigene.1.1.st (19)
	pd.ha.2.0 (1)
	pd.hc.g110 (19)
	pd.hg.focus (23)
	pd.hg.u133.plus.2 (198)
	pd.hg.u133a (66)
	pd.hg.u133a.2 (39)
	pd.hg.u133a.tag (20)
	pd.hg.u133b (26)
	pd.hg.u219 (35)
	pd.hg.u95a (46)
	pd.hg.u95av2 (46)
	pd.hg.u95b (18)
	pd.hg.u95c (18)
	pd.hg.u95d (17)
	pd.hg.u95e (18)
	pd.hg18.60mer.expr (35)
	pd.ht.2.0 (1)
	pd.ht.hg.u133.plus.pm (31)
	pd.ht.hg.u133a (24)
	pd.ht.mg.430a (22)

	pd.hta.2.0 (84)
	pd.htax.2.0 (1)
	pd.htax.hta.2.0 (1)
	pd.htXa.2.0 (1)
	pd.hu6800 (28)
	pd.huex.1.0.st (0)
	pd.huex.1.0.st.v2 (96)
	pd.hugene.1.0.st.v1 (219)
	pd.hugene.1.1.st.v1 (48)
	pd.hugene.2.0.st (95)
	pd.hugene.2.1.st (45)
	pd.hxta.2.0 (1)
	pd.maize (19)
	pd.mapping250k.nsp (55)
	pd.mapping250k.sty (57)
	pd.mapping50k.hind240 (53)
	pd.mapping50k.xba240 (58)
	pd.margene.1.0.st (18)
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	pd.medgene.1.0.st (17)
	pd.medgene.1.1.st (17)
	pd.medicago (19)
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	pd.mg.u74av2 (26)
	pd.mg.u74b (21)
	pd.mg.u74bv2 (21)
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	pd.mg.u74cv2 (19)
	pd.mirna.1.0 (21)
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	pd.mirna.3.0 (19)
	pd.mirna.3.1 (20)
	pd.mirna.4.0 (31)
	pd.moe430a (22)
	pd.moe430b (18)
	pd.moex.1.0.st (0)
	pd.moex.1.0.st.v1 (22)
	pd.mogene.1.0.st.v1 (81)
	pd.mogene.1.1.st.v1 (22)
	pd.mogene.2.0.st (54)
	pd.mogene.2.1.st (37)
	pd.mouse430.2 (43)
	pd.mouse430a.2 (23)
	pd.mta.1.0 (32)
	pd.mu11ksuba (17)
	pd.mu11ksubb (19)
	pd.nugo.hs1a520180 (18)
	pd.nugo.mm1a520177 (18)
	pd.ovigene.1.0.st (18)
	pd.ovigene.1.1.st (19)
	pd.pae.g1a (17)
	pd.plasmodium.anopheles (17)
	pd.poplar (19)
	pd.porcine (21)
	pd.porgene.1.0.st (19)
	pd.porgene.1.1.st (19)
	pd.primeview (1)
	pd.rabgene.1.0.st (18)
	pd.rabgene.1.1.st (17)
	pd.rae230a (28)
	pd.rae230b (18)
	pd.raex.1.0.st (0)
	pd.raex.1.0.st.v1 (19)
	pd.ragene.1.0.st.v1 (20)
	pd.ragene.1.1.st.v1 (18)
	pd.ragene.2.0.st (21)
	pd.ragene.2.1.st (18)
	pd.rat230.2 (46)
	pd.rcngene.1.0.st (20)
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	pd.rg.u34a (17)
	pd.rg.u34b (18)
	pd.rg.u34c (17)
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