BiocParallel

Bioconductor facilities for parallel evaluation

Bioconductor version: Development (3.0)

This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects.

Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Michel Lang [aut], Ryan Thompson [aut]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BiocParallel")

To cite this package in a publication, start R and enter:

    citation("BiocParallel")

Documentation

PDF R Script Introduction to BiocParallel
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software
Version 0.7.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL-2 | GPL-3
Depends
Imports methods, parallel, foreach, tools, BatchJobs, BBmisc, BiocGenerics
Suggests doParallel, snow, Rmpi, RUnit, BiocStyle, knitr
System Requirements
URL
Depends On Me DEXSeq, GenomicFiles, pRoloc, ShortRead
Imports Me ChIPQC, GenomicAlignments, h5vc, HTSeqGenie, synapter, TFBSTools, VariantFiltering, VariantTools
Suggests Me chimera

Package Downloads

Package Source BiocParallel_0.7.0.tar.gz
Windows Binary BiocParallel_0.7.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BiocParallel_0.5.19.tgz
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center