ternarynet

DOI: 10.18129/B9.bioc.ternarynet    

This is the development version of ternarynet; for the stable release version, see ternarynet.

Ternary Network Estimation

Bioconductor version: Development (3.9)

A computational Bayesian approach to ternary gene regulatory network estimation from gene perturbation experiments.

Author: Matthew N. McCall <mccallm at gmail.com>, Anthony Almudevar <Anthony_Almudevar at urmc.rochester.edu>, David Burton <David_Burton at urmc.rochester.edu>, Harry Stern <harry.stern at rochester.edu>

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("ternarynet")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("ternarynet", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ternarynet")

 

PDF R Script ternarynet: A Computational Bayesian Approach to Ternary Network Estimation
PDF   Reference Manual

Details

biocViews CellBiology, GraphAndNetwork, Software
Version 1.27.0
In Bioconductor since BioC 2.10 (R-2.15) (6.5 years)
License GPL (>= 2)
Depends R (>= 2.10.0), methods
Imports utils, igraph
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ternarynet_1.27.0.tar.gz
Windows Binary ternarynet_1.27.0.zip
Mac OS X 10.11 (El Capitan) ternarynet_1.27.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ternarynet
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ternarynet
Package Short Url http://bioconductor.org/packages/ternarynet/
Package Downloads Report Download Stats

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