To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BiocParallel")

In most cases, you don't need to download the package archive at all.

BiocParallel

Bioconductor facilities for parallel evaluation

Bioconductor version: Release (3.1)

This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects.

Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Michel Lang [aut], Ryan Thompson [aut]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BiocParallel")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BiocParallel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocParallel")

 

PDF Introduction to BiocParallel
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software
Version 1.2.1
In Bioconductor since BioC 2.13 (R-3.0)
License GPL-2 | GPL-3
Depends methods
Imports futile.logger, parallel, snow
LinkingTo
Suggests BiocGenerics, tools, foreach, BatchJobs, BBmisc, doParallel, Rmpi, GenomicRanges, RNAseqData.HNRNPC.bam.chr14, Rsamtools, GenomicAlignments, ShortRead, codetools, RUnit, BiocStyle, knitr
SystemRequirements
Enhances
URL
Depends On Me ClassifyR, CopywriteR, DEXSeq, GenomicFiles, hiReadsProcessor, InPAS, MBASED, metagene, MSnbase, pRoloc, Rqc, ShortRead, SigCheck
Imports Me ChIPQC, cpvSNP, derfinder, DESeq2, EMDomics, flowcatchR, GenomicAlignments, gmapR, h5vc, HTSeqGenie, MethylAid, parglms, qpgraph, QuasR, RUVcorr, soGGi, synapter, TFBSTools, VariantFiltering, VariantTools
Suggests Me ALDEx2, chimera, DEGreport, MethylAidData, oneChannelGUI, specL, systemPipeR
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BiocParallel_1.2.1.tar.gz
Windows Binary BiocParallel_1.2.1.zip
Mac OS X 10.6 (Snow Leopard) BiocParallel_1.2.1.tgz
Mac OS X 10.9 (Mavericks) BiocParallel_1.2.1.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center