To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HDF5Array")

In most cases, you don't need to download the package archive at all.

HDF5Array

DOI: 10.18129/B9.bioc.HDF5Array    

This is the development version of HDF5Array; for the stable release version, see HDF5Array.

HDF5 back end for DelayedArray objects

Bioconductor version: Development (3.6)

An array-like container for convenient access and manipulation of HDF5 datasets. Supports delayed operations and block processing.

Author: Hervé Pagès

Maintainer: Hervé Pagès <hpages at fredhutch.org>

Citation (from within R, enter citation("HDF5Array")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HDF5Array")

Documentation

PDF   Reference Manual

Details

biocViews Annotation, Coverage, DataRepresentation, GenomeAnnotation, Infrastructure, Sequencing, Software
Version 1.5.17
In Bioconductor since BioC 3.3 (R-3.3) (1.5 years)
License Artistic-2.0
Depends R (>= 3.4), methods, DelayedArray(>= 0.3.18), rhdf5
Imports utils, tools, BiocGenerics, S4Vectors, IRanges
LinkingTo
Suggests h5vcData, SummarizedExperiment(>= 1.5.6), GenomicRanges, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me beachmat, bsseq
Suggests Me DelayedArray, MultiAssayExperiment, scran, SummarizedExperiment
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HDF5Array_1.5.17.tar.gz
Windows Binary HDF5Array_1.5.17.zip
Mac OS X 10.11 (El Capitan) HDF5Array_1.5.17.tgz
Source Repository git clone https://git.bioconductor.org/packages/HDF5Array
Package Short Url http://bioconductor.org/packages/HDF5Array/
Package Downloads Report Download Stats

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