preprocessCore
A collection of pre-processing functions
Bioconductor version: Release (3.19)
A library of core preprocessing routines.
Author: Ben Bolstad <bmb at bmbolstad.com>
Maintainer: Ben Bolstad <bmb at bmbolstad.com>
Citation (from within R, enter
citation("preprocessCore")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("preprocessCore")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | Infrastructure, Software |
Version | 1.66.0 |
In Bioconductor since | BioC 2.1 (R-2.6) (17 years) |
License | LGPL (>= 2) |
Depends | |
Imports | stats |
System Requirements | |
URL | https://github.com/bmbolstad/preprocessCore |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | affyPLM, cqn, crlmm |
Imports Me | affy, BloodGen3Module, bnbc, cn.farms, cypress, EMDomics, ExiMiR, fastLiquidAssociation, frma, frmaTools, hipathia, iCheck, InPAS, lumi, MADSEQ, MBCB, MBQN, MEDIPS, methylclock, mimager, minfi, MSPrep, MSstats, NormalyzerDE, oligo, PanomiR, PECA, PhosR, Pigengene, qPLEXanalyzer, quantiseqr, sesame, soGGi, tidybulk, yarn, GSE13015, ADAPTS, bulkAnalyseR, cinaR, FARDEEP, HEMDAG, lilikoi, MetaIntegrator, MiDA, noise, noisyr, oncoPredict, retriever, SMDIC, WGCNA |
Suggests Me | DAPAR, MsCoreUtils, multiClust, QFeatures, roastgsa, scp, splatter, wateRmelon, aroma.affymetrix, aroma.core, glycanr, SCdeconR, wrMisc, wrTopDownFrag |
Links To Me | affy, affyPLM, crlmm, oligo |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | preprocessCore_1.66.0.tar.gz |
Windows Binary | preprocessCore_1.66.0.zip |
macOS Binary (x86_64) | preprocessCore_1.66.0.tgz |
macOS Binary (arm64) | preprocessCore_1.66.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/preprocessCore |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/preprocessCore |
Bioc Package Browser | https://code.bioconductor.org/browse/preprocessCore/ |
Package Short Url | https://bioconductor.org/packages/preprocessCore/ |
Package Downloads Report | Download Stats |