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Preprocessing and analysis for single microarrays and microarray batches.

Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("frma")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

frma: Preprocessing for single arrays and array batches PDF R Script
Reference Manual PDF


biocViews Microarray, Preprocessing, Software
Version 1.54.0
In Bioconductor since BioC 2.6 (R-2.11) (14 years)
License GPL (>= 2)
Depends R (>= 2.10.0), Biobase(>= 2.6.0)
Imports Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils, BiocGenerics
System Requirements
URL http://bioconductor.org
See More
Suggests hgu133afrmavecs, frmaExampleData
Linking To
Depends On Me
Imports Me ChIPXpress, DeSousa2013, rat2302frmavecs
Suggests Me antiProfilesData, frmaTools
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package frma_1.54.0.tar.gz
Windows Binary frma_1.54.0.zip
macOS Binary (x86_64) frma_1.54.0.tgz
macOS Binary (arm64) frma_1.54.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/frma
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/frma
Bioc Package Browser https://code.bioconductor.org/browse/frma/
Package Short Url https://bioconductor.org/packages/frma/
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