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Recent Commits

Last 10 commit to Bioconductor release:

biomaRt	2026-11-06 09:36:18 +0100
OmnipathR	2026-11-06 00:08:22 +0000
QRscore	2026-11-05 21:39:11 +0000
STRINGdb	2026-11-04 14:32:02 +0100
RbowtieCuda	2026-11-03 14:48:44 +0100
ChIPseeker	2026-11-03 11:13:04 +0800
MungeSumstats	2026-11-02 08:40:08 -0500
BreastSubtypeR	2026-11-01 10:00:40 +0100
ggtree	2026-10-29 14:24:45 +0800
hoodscanR	2026-10-29 10:18:12 +1030

Last 10 commit to Bioconductor devel:

STRINGdb	2026-11-06 12:41:58 +0100
DRIMSeq	2026-11-06 12:02:04 +0100
IsoformSwitchAnalyzeR	2026-11-06 09:31:39 +0100
ZarrArray	2026-11-05 22:25:57 -0800
iClusterPlus	2026-11-05 23:29:11 -0500
augere.screen	2026-11-06 13:38:43 +1100
augere.de	2026-11-06 13:11:36 +1100
augere.core	2026-11-06 12:41:55 +1100
spicyR	2026-11-06 12:07:24 +1100
clusterExperiment	2026-11-05 16:12:11 -0800

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Newest Packages

Software Packages

MRManalyzeR	.
tTEscanR	A user-friendly integrative R package for quantifying and visualizing translation efficiency from sequencing data in diverse biological systems
scProkaR	Microbial Single-Cell RNA-Seq Analysis for Bacterial Systems
lantern	Ancestry-Specific Rare Variant Association Analysis
enrichmet	enrichmet: R package for Quick and Easy Pathway and Network Analyses in Metabolomics
seqRdna	Tools for Calculating for rDNA in Sequencing Data
MagellanNTK	Configurable Shiny data-analysis workflows
alabaster.treese	Load and Save TreeSummarizedExperiment from File
WithinHostExperiment	Within-Host Pathogen Variant QC, Diversity, and Bottleneck
strainspy	Strain Level Microbiome Wide Association Studies

Experiment Data Packages

GSE142512	450K and EPIC Methylation ExperimentHub Data from GEO
SpaMTPData	Experiment Data Resources for SpaMTP Workflows
AnnotatedBCGEData	100+ Curated Breast Cancer Gene Expression Data sets
HuMMANet	Curated Paired Human Microbiome-Metabolome Study Data
DaparToolshedData	Data accompanying the DaparToolshed and Prostar 2 packages
GSE280465	EPICv2 Methylation ExperimentHub Data from GEO
curatedBreastData	Curated breast cancer gene expression data with survival and treatment information
CLAMPData	Experiment data for CLAMP package
HumanRetinaLRSData	Long-read RNA-seq gene count data from human retinal organoids
DMRsegaldata	Example DNAm Data for DMRsegal

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Single Package Builder

All Current Submissions

Recent Submissions

tn5bias

spliceTerrain

apbCatalogR

R4AOP

IsoNetAnalyzeR

bigWig

RGenEDA

fuzzyCell

MacrophageFramework

MsBackendTimsTof: add support for Bruker TimsTOF MS data files to the Spectra package

splitTypeR

HTAN

OncoSeq

SegStability

conformeR

MultiOmicsCancer

miREA

causalASCEND

superintervalsr

PhiSpace

Recent Builds

JASPAR	2026-11-04T09:55:17
JASPAR	2026-11-04T09:33:01
CycleMix	2026-10-27T17:34:01
CycleMix	2026-10-27T13:39:36
JASPAR	2026-10-14T13:50:27
enrichmet	2026-10-14T09:10:25
ctdR	2026-09-25T08:00:01
GXwasR	2026-09-22T10:53:30
enrichmet	2026-09-19T01:24:38
enrichmet	2026-09-18T23:50:30
enrichmet	2026-09-18T22:14:23
enrichmet	2026-09-18T21:53:44
enrichmet	2026-09-18T21:43:00
GXwasR	2026-09-18T21:25:29
enrichmet	2026-09-18T21:05:05
GXwasR	2026-09-18T20:50:30
AnnotationGx	2026-09-18T16:02:23
ctdR	2026-09-18T07:57:22
AnnotatedBCGEData	2026-09-11T23:41:58
AnnotatedBCGEData	2026-09-11T18:50:15

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Mirror Status

Last updated 2026-11-05T23:05:00-05:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	yes	no
https://bioconductor.unipi.it	yes	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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