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Recent Commits

Last 10 commit to Bioconductor release:

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Last 10 commit to Bioconductor devel:

ChIPanalyser	2026-04-28 08:46:20 -0400
gDRcore	2026-08-14 15:40:05 +0200
methylumi	2026-08-14 05:16:05 -0600
PoDCall	2026-08-14 09:31:45 +0200
CLAMP	2026-08-14 00:27:31 -0600
ClassifyR	2026-08-14 15:46:02 +1000
fraq	2026-08-12 17:47:11 -0700
Rsubread	2026-08-14 07:51:48 +1000
crisprDesign	2026-08-13 14:15:22 -0700
SpaceTrooper	2026-08-13 17:24:10 +0200

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Newest Packages

Software Packages

DuckDBGRanges	DuckDB-Backed GenomicRanges Implementation
DuckDBDataFrame	DuckDB-Backed DataFrame and Table Structures
EMTscore	Calculate EMT Scores Based on Omics Data
fishash	Cell Hashing with One-Sided Fisher Test
GSEAlens	Gene Set Enrichment Analysis Interactive Explorer
RmzTabM	R API for the mzTab-M Reference Implementation
SimiCviz	Visualization Tools for Gene Regulatory Network Analysis
multipointR	A package to compare intensities of point patterns across samples with spatial parametric models
MetaPathNet	KEGG-Based Metabolic and Signaling Network Analysis for Systems Biology
MsBackendMetabolomicsWorkbench	Retrieve Mass Spectrometry Data from Metabolomics Workbench

Experiment Data Packages

GSE280465	EPICv2 Methylation ExperimentHub Data from GEO
curatedBreastData	Curated breast cancer gene expression data with survival and treatment information
CLAMPData	Experiment data for CLAMP package
HumanRetinaLRSData	Long-read RNA-seq gene count data from human retinal organoids
DMRsegaldata	Example DNAm Data for DMRsegal
curatedCRCData	Colorectal Cancer Gene Expression Analysis
EMTscoreData	Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData	Experimental Data for MutSeqR Examples
dominatRData	Datasets for R Package dominatR
DoReMiTra	Orchestrating Blood Radiation Transcriptomic Data

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Single Package Builder

All Current Submissions

Recent Submissions

SpaMTPData

CorNetto

MiCARA

circaTime

iconic

hmagmaR: Chromatin-based GWAS SNP-to-gene mapping tool

KODAMA is moving to Bioconductor

fastEmbedR: embedding for fast opentsne and umap

bppg

ECLIPSE: Enhanced CLonotypic Inference via Prediction of Single-cell Expression

cellchatr: Fast CellChat Database Querying Backed by Rust

Protein2Tissue

GENCODEHub

TxDb.Osativa.MSU.RGAP7

BatchVaria

geneClusterPattern

perturbMatch

perturbMatchData

gdrplatform release [seventh package: gDRplots]

LongOmicsTraj

Recent Builds

looplook	2026-08-13T11:30:11
CONCERTDR	2026-08-13T03:42:05
looplook	2026-08-12T10:40:50
looplook	2026-08-11T23:45:04
looplook	2026-08-11T11:15:27
TSSr	2026-08-06T17:37:44
EMTscore	2026-08-04T21:47:01
TSSr	2026-08-04T07:34:29
Fancy	2026-08-04T07:30:39
fishash	2026-07-26T02:49:10
fishash	2026-07-26T02:06:25
ctdR	2026-07-24T09:41:22
SwarnSeq	2026-07-22T13:28:36
OmniAgeRData	2026-07-21T13:57:05
OmniAgeR	2026-07-21T13:46:49
GSEAlens	2026-07-21T10:36:08
GSEAlens	2026-07-21T10:07:53
OmniAgeR	2026-07-21T07:36:01
OmniAgeR	2026-07-21T07:22:33
GSEAlens	2026-07-19T15:15:19

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Mirror Status

Last updated 2026-08-14T04:04:56-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	no	no
https://bioconductor.unipi.it	yes	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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