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This page was built 2025-03-20T07:05:09Z.
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Release
Devel
Recent Commits
Last 10 commit to Bioconductor release:
| fgsea | 2025-03-19 14:40:31 -0500 |
| epiregulon.extra | 2025-03-19 02:40:02 -0700 |
| CyTOFpower | 2025-03-18 19:32:59 -0700 |
| PRONE | 2025-03-18 21:41:04 +0100 |
| escape | 2025-03-18 14:36:25 -0500 |
| methodical | 2025-03-18 14:25:12 +0000 |
| orthos | 2025-03-18 10:53:26 +0100 |
| scDDboost | 2025-03-18 10:28:41 +0800 |
| EBSeq | 2025-03-18 09:43:20 +0800 |
| plyxp | 2025-03-17 10:49:27 -0400 |
Last 10 commit to Bioconductor devel:
| puma | 2025-03-20 11:41:55 +0800 |
| Rsubread | 2025-03-20 13:52:47 +1100 |
| multistateQTL | 2025-03-20 12:30:53 +1100 |
| QTLExperiment | 2025-03-20 12:28:42 +1100 |
| fgsea | 2025-03-19 18:17:02 -0500 |
| HDF5Array | 2025-03-19 15:22:56 -0700 |
| scRepertoire | 2025-03-19 16:30:01 -0500 |
| groHMM | 2025-03-19 15:55:24 -0500 |
| spoon | 2025-03-19 16:46:40 -0400 |
| BindingSiteFinder | 2025-03-19 20:37:49 +0100 |
Newest Packages
Software Packages
| XAItest | XAItest: Enhancing Feature Discovery with eXplainable AI |
| alabaster.sfe | Language agnostic on disk serialization of SpatialFeatureExperiment |
| SVP | Predicting cell states and their variability in single-cell or spatial omics data |
| DNAcycP2 | DNA Cyclizability Prediction |
| TENET | R package for TENET (Tracing regulatory Element Networks using Epigenetic Traits) to identify key transcription factors |
| CPSM | CPSM: Cancer patient survival model |
| jazzPanda | Finding spatially relevant marker genes in image based spatial transcriptomics data |
| terapadog | Translational Efficiency Regulation Analysis using the PADOG Method |
| poem | POpulation-based Evaluation Metrics |
| OSTA.data | OSTA book data |
Experiment Data Packages
| TENET.ExperimentHub | Experiment data for the TENET package |
| humanHippocampus2024 | Access to SRT and snRNA-seq data from spatial_HPC project |
| eoPredData | ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile |
| ProteinGymR | Programmatic access to ProteinGym datasets in R/Bioconductor |
| CoSIAdata | VST normalized RNA-Sequencing data with annotations for multiple species samples from Bgee |
| LegATo | LegATo: Longitudinal mEtaGenomic Analysis Toolkit |
| EpipwR.data | EpipwR.data: Reference data for EpipwR |
| bugphyzz | A harmonized data resource and software for enrichment analysis of microbial physiologies |
| homosapienDEE2CellScore | Example Data Package for CellScore |
| JohnsonKinaseData | Kinase PWMs based on data published by Johnson et al. 2023 and Yaron-Barir et al. 2024 |
Single Package Builder
All Current Submissions
Recent Submissions
| miaTime |
| BenchHub |
| MSstatsWeightedSummary |
| mitology |
| imageTCGA |
| rigvf |
| BatchSVG |
| notame |
| Ibex |
| LipidTrend |
| barbieQ |
| spacexr |
| TRADEtools |
| methylTracer |
| pathMED |
| decemedip |
| Coralysis |
| stPipe |
| LongMod123 |
| HVP |
Recent Builds
| shinyDSP | 2025-03-19T19:32:50 |
| shinyDSP | 2025-03-19T19:19:44 |
| rigvf | 2025-03-19T12:04:30 |
| DeconvoBuddies | 2025-03-18T21:28:12 |
| batchCorr | 2025-03-18T15:17:44 |
| SmartPhos | 2025-03-18T14:27:42 |
| SmartPhos | 2025-03-18T11:54:00 |
| RbowtieCuda | 2025-03-17T18:06:46 |
| rigvf | 2025-03-17T14:01:25 |
| rigvf | 2025-03-17T13:33:16 |
| linkSet | 2025-03-17T11:30:21 |
| peakCombiner | 2025-03-17T08:39:15 |
| Site2Target | 2025-03-16T18:55:59 |
| SmartPhos | 2025-03-15T09:57:22 |
| SVP | 2025-03-14T14:46:23 |
| SmartPhos | 2025-03-14T11:17:22 |
| BreastSubtypeR | 2025-03-13T21:29:35 |
| scLANE | 2025-03-13T19:21:16 |
| BreastSubtypeR | 2025-03-13T19:18:04 |
| spacexr | 2025-03-13T19:11:54 |
Support
Comment: Using edgeR::voomLmFit for t...
2025-03-19T23:49:10Z
2025-03-19T23:49:10Z
Comment: Using edgeR::voomLmFit for t...
2025-03-19T21:55:14Z
2025-03-19T21:55:14Z
Error in cnetplot
2025-03-19T17:07:25Z
2025-03-19T17:07:25Z
Comment: Using TPM from tximport of S...
2025-03-19T15:26:54Z
2025-03-19T15:26:54Z
Comment: GAGE kegg.gsets() self-signe...
2025-03-19T14:43:28Z
2025-03-19T14:43:28Z
Mirror Status
Last updated 2025-03-19T15:06:09-04:00. (Will be updated every 24 hours).
To use a Bioconductor mirror use the R function `chooseBioCmirror()`| URL | Mirror | Release | Devel |
|---|---|---|---|
| https://bioconductor.org/ | yes | yes | yes |
| https://bioconductor.posit.co/ | yes | yes | yes |
| https://bioconductor.statistik.tu-dortmund.de/ | yes | yes | yes |
| https://ftp.gwdg.de/pub/misc/bioconductor/ | yes | yes | yes |
| https://bioconductor.riken.jp/ | yes | yes | yes |
| https://free.nchc.org.tw/bioconductor/ | yes | no | no |
| https://mirrors.tuna.tsinghua.edu.cn/bioconductor/ | yes | yes | yes |
| https://mirrors.nju.edu.cn/bioconductor/ | yes | yes | yes |
| https://mirrors.ustc.edu.cn/bioc/ | yes | no | no |
| https://mirrors.westlake.edu.cn/bioconductor | no | yes | no |
| https://mirrors.zju.edu.cn/bioconductor | no | yes | yes |
| https://bioconductor.uib.no/ | yes | yes | yes |
| https://bioconductor.unipi.it | no | no | no |
| https://cran.asia | no | yes | yes |
| https://mirror.aarnet.edu.au/pub/bioconductor | no | no | no |
| https://mirrors.dotsrc.org/bioconductor/ | yes | yes | yes |
| https://mirror.accum.se/mirror/bioconductor.org/ | yes | yes | yes |