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Recent Commits

Last 10 commit to Bioconductor release:

RFLOMICS2026-06-30 14:05:16 +0200
BASiCStan2026-06-30 11:41:03 +0100
scater2026-06-30 11:17:44 +0100
EBSeq2026-06-30 17:59:49 +0800
fenr2026-06-30 09:08:37 +0100
Moonlight2R2026-06-30 09:48:04 +0200
transmogR2026-06-30 14:52:49 +0930
alabaster.base2026-06-30 13:46:35 +1000
motifTestR2026-06-30 11:27:03 +0930
extraChIPs2026-06-29 14:18:21 +0930

Last 10 commit to Bioconductor devel:

GSVA2026-06-30 16:47:48 +0200
CrcBiomeScreen2026-06-30 12:01:27 +0100
BASiCStan2026-06-30 11:40:37 +0100
scater2026-06-30 11:16:35 +0100
EBSeq2026-06-30 17:58:33 +0800
fenr2026-06-30 09:06:55 +0100
netboost2026-06-30 08:43:27 +0200
transmogR2026-06-30 14:32:57 +0930
meshes2026-06-30 13:19:29 +0800
alabaster.base2026-06-30 13:46:35 +1000

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Newest Packages

Software Packages

CGRphylo2 Chaos Game Representation for Phylogenetic Analysis
scBatchQC Batch-Aware Cell Quality Control for Single-Cell RNA-seq
scFastDE Fast Donor-Weighted Pseudo-Bulk Differential Expression for scRNA-seq
gesel Search for Interesting Gene Sets
EMMA EMMA: Enrichment Methods Matter for enabling fully reproducible and provenance-aware pathway analysis
CLAMP Curated Latent-variable Analysis with Molecular Priors
BenchHub Comprehensive Collection of Curated Benchmarking Datasets and their Evaluation
PostChicago PostChicago - visualization and integration of Capture-(Hi)C data
iSEEid iSEE extension to assist in identifying sets of samples/cells
pgen2gds Format Conversion from PLINK2 PGEN to GDS

Experiment Data Packages

CLAMPData Experiment data for CLAMP package
HumanRetinaLRSData Long-read RNA-seq gene count data from human retinal organoids
DMRsegaldata Example DNAm Data for DMRsegal
curatedCRCData Colorectal Cancer Gene Expression Analysis
EMTscoreData Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData Experimental Data for MutSeqR Examples
dominatRData Datasets for R Package dominatR
DoReMiTra Orchestrating Blood Radiation Transcriptomic Data
nmrdata Example 1d NMR Data for Metabolic Profiling
ChIPDBData ChIP-seq Target Databases for TFEA.ChIP

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Single Package Builder

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Recent Builds
barmixR 2026-06-27T20:08:26
OmniAgeRData 2026-06-27T11:28:52
OmniAgeR 2026-06-27T11:25:10
OmniAgeR 2026-06-26T17:31:26
mesa 2026-06-26T12:09:45
GExPipe 2026-06-22T11:32:29
GExPipe 2026-06-22T11:17:06
GExPipe 2026-06-22T10:52:10
GExPipe 2026-06-22T10:43:51
GExPipe 2026-06-22T10:18:21
ProteinBatcher 2026-06-22T09:39:00
ProteinBatcher 2026-06-19T09:39:53
wSIR 2026-06-19T04:46:15
CycleMix 2026-06-18T21:50:18
CycleMix 2026-06-18T16:15:29
mesa 2026-06-17T14:56:35
spammR 2026-06-12T15:30:31
spammR 2026-06-11T23:50:33
CGRphylo2 2026-06-11T23:24:34
mesa 2026-06-11T15:38:49
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Mirror Status

Last updated 2026-06-30T07:04:58-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`
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https://bioconductor.statistik.tu-dortmund.de/ yes yes yes
https://ftp.gwdg.de/pub/misc/bioconductor/ yes yes yes
https://bioconductor.riken.jp/ yes yes yes
https://free.nchc.org.tw/bioconductor/ yes no no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/ yes yes yes
https://mirrors.nju.edu.cn/bioconductor/ yes yes yes
https://mirrors.ustc.edu.cn/bioc/ yes yes yes
https://mirrors.westlake.edu.cn/bioconductor yes yes no
https://mirrors.zju.edu.cn/bioconductor yes yes yes
https://bioconductor.uib.no/ yes no no
https://bioconductor.unipi.it yes no no
https://cran.asia yes yes yes
https://mirror.aarnet.edu.au/pub/bioconductor yes no no
https://mirrors.dotsrc.org/bioconductor/ yes yes yes
https://mirror.accum.se/mirror/bioconductor.org/ yes yes yes
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