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Recent Commits

Last 10 commit to Bioconductor release:

AnVILWorkflow	2026-08-31 19:44:40 +0900
anndataR	2026-09-18 08:34:48 +0200
igblastr	2026-09-17 23:10:25 -0700
kebabs	2026-09-17 10:49:40 +0200
ramr	2026-09-16 20:34:44 +0200
bedbaser	2026-09-16 10:56:50 -0400
GOpro	2026-09-16 08:38:11 +0200
S4Vectors	2026-09-15 10:30:21 -0700
BatchQC	2026-09-14 15:54:49 -0400
PhyloProfile	2026-09-14 18:10:04 +0200

Last 10 commit to Bioconductor devel:

scDiagnostics	2026-09-19 11:31:16 -0400
levi	2026-09-19 19:48:21 -0300
CLAMP	2026-09-19 16:54:46 -0600
scanMiR	2026-09-19 15:05:57 +0200
scanMiRApp	2026-09-19 14:52:37 +0200
MsDataHub	2026-09-19 10:16:49 +0000
animalcules	2026-09-18 22:30:45 +0300
profileplyr	2026-09-18 10:39:24 -0400
consICA	2026-09-18 16:44:11 +0200
ANCOMBC	2026-09-18 09:42:05 -0400

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Newest Packages

Software Packages

geneClusterPattern	Plot conserved gene pattern across multiple species
gdscloud	Cloud Storage Access for GDS Files
QFeaturesGUI	A suite of shiny apps to use the main functionalities of the QFeatures package
CorNetto	Knowledge-Guided Multi-Omic Correlation Network Analysis
sigvar	Quantify and visualize variability of mutational signatures within and across samples
CONCERTDR	Drug Response Data Analysis Using CMap Database
ProteinBatcher	An end-to-end proteomics workflow with condition-aware imputation, flexible statistical modelling and interactive visualization
BiocDuckDB	Bioconductor DuckDB Integration and High-Level I/O
normScore	Evaluation and Ranking of Normalization Methods for Proteomics Data
scCertify	Explainable Confidence Scoring for Single-Cell Annotations

Experiment Data Packages

HuMMANet	Curated Paired Human Microbiome-Metabolome Study Data
DaparToolshedData	Data accompanying the DaparToolshed and Prostar 2 packages
GSE280465	EPICv2 Methylation ExperimentHub Data from GEO
curatedBreastData	Curated breast cancer gene expression data with survival and treatment information
CLAMPData	Experiment data for CLAMP package
HumanRetinaLRSData	Long-read RNA-seq gene count data from human retinal organoids
DMRsegaldata	Example DNAm Data for DMRsegal
curatedCRCData	Colorectal Cancer Gene Expression Analysis
EMTscoreData	Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData	Experimental Data for MutSeqR Examples

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Single Package Builder

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Recent Submissions

enviPathR

loopQTL

panpathAudit

CascadeR

paweh

crossarrayEWAS

exposomeSC

WithinHostExperiment

MsBackendParquet

tewas

scProkaR

MsExperimentStash to store mass spectrometry result objects in portable and interoperable formats

CDEnrich

consensusRegions

mgcca

GenomicDataStream

scGenePanel

path2path

NADIA

IntrinsicScan

Recent Builds

enrichmet	2026-09-19T01:24:38
enrichmet	2026-09-18T23:50:30
enrichmet	2026-09-18T22:14:23
enrichmet	2026-09-18T21:53:44
enrichmet	2026-09-18T21:43:00
GXwasR	2026-09-18T21:25:29
enrichmet	2026-09-18T21:05:05
GXwasR	2026-09-18T20:50:30
AnnotationGx	2026-09-18T16:02:23
ctdR	2026-09-18T07:57:22
AnnotatedBCGEData	2026-09-11T23:41:58
AnnotatedBCGEData	2026-09-11T18:50:15
AnnotatedBCGEData	2026-09-11T17:56:25
OmniAgeR	2026-09-06T08:12:17
OmniAgeRData	2026-09-06T08:08:25
spammR	2026-09-04T15:55:40
OmniAgeR	2026-09-04T09:09:58
OmniAgeRData	2026-09-04T08:57:51
OmniAgeRData	2026-09-04T08:13:04
spammR	2026-09-03T18:57:10

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Mirror Status

Last updated 2026-09-19T14:04:53-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	no	no
https://bioconductor.unipi.it	yes	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	no	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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