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This R package for performing module repertoire analyses and generating fingerprint representations

Bioconductor version: Release (3.19)

The BloodGen3Module package provides functions for R user performing module repertoire analyses and generating fingerprint representations. Functions can perform group comparison or individual sample analysis and visualization by fingerprint grid plot or fingerprint heatmap. Module repertoire analyses typically involve determining the percentage of the constitutive genes for each module that are significantly increased or decreased. As we describe in details; and, the results of module repertoire analyses can be represented in a fingerprint format, where red and blue spots indicate increases or decreases in module activity. These spots are subsequently represented either on a grid, with each position being assigned to a given module, or in a heatmap where the samples are arranged in columns and the modules in rows.

Author: Darawan Rinchai [aut, cre]

Maintainer: Darawan Rinchai <drinchai at>

Citation (from within R, enter citation("BloodGen3Module")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

BloodGen3Module: Modular Repertoire Analysis and Visualization HTML R Script
Reference Manual PDF


biocViews GeneExpression, Software, Visualization
Version 1.12.0
In Bioconductor since BioC 3.13 (R-4.1) (3 years)
License GPL-2
Depends R (>= 4.1)
Imports SummarizedExperiment, ExperimentHub, methods, grid, graphics, stats, grDevices, circlize, testthat, ComplexHeatmap(>= 1.99.8), ggplot2, matrixStats, gtools, reshape2, preprocessCore, randomcoloR, V8, limma
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Suggests RUnit, devtools, BiocGenerics, knitr, rmarkdown
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Follow Installation instructions to use this package in your R session.

Source Package BloodGen3Module_1.12.0.tar.gz
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macOS Binary (x86_64) BloodGen3Module_1.12.0.tgz
macOS Binary (arm64) BloodGen3Module_1.12.0.tgz
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Source Repository (Developer Access) git clone
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