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A collection of pre-processing functions

Bioconductor version: Release (3.19)

A library of core preprocessing routines.

Author: Ben Bolstad <bmb at>

Maintainer: Ben Bolstad <bmb at>

Citation (from within R, enter citation("preprocessCore")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews Infrastructure, Software
Version 1.66.0
In Bioconductor since BioC 2.1 (R-2.6) (17 years)
License LGPL (>= 2)
Imports stats
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Depends On Me affyPLM, cqn, crlmm
Imports Me affy, BloodGen3Module, bnbc, cn.farms, cypress, EMDomics, ExiMiR, fastLiquidAssociation, frma, frmaTools, hipathia, iCheck, InPAS, lumi, MADSEQ, MBCB, MBQN, MEDIPS, methylclock, mimager, minfi, MSPrep, MSstats, NormalyzerDE, oligo, PanomiR, PECA, PhosR, Pigengene, qPLEXanalyzer, quantiseqr, sesame, soGGi, tidybulk, yarn, GSE13015, ADAPTS, bulkAnalyseR, cinaR, FARDEEP, HEMDAG, lilikoi, MetaIntegrator, MiDA, noise, noisyr, oncoPredict, retriever, SMDIC, WGCNA
Suggests Me DAPAR, MsCoreUtils, multiClust, QFeatures, roastgsa, scp, splatter, wateRmelon, aroma.affymetrix, aroma.core, glycanr, SCdeconR, wrMisc, wrTopDownFrag
Links To Me affy, affyPLM, crlmm, oligo
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Source Package preprocessCore_1.66.0.tar.gz
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macOS Binary (x86_64) preprocessCore_1.66.0.tgz
macOS Binary (arm64) preprocessCore_1.66.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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