HelloRangesData
Data for the HelloRanges tutorial vignette
Bioconductor version: 3.23 · Package version: 1.38.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Provides the data that were used in the bedtools tutorial by Aaron Quinlan (http://quinlanlab.org/tutorials/bedtools/bedtools.html). Includes a subset of the DnaseI hypersensitivity data from "Maurano et al. Systematic Localization of Common Disease-Associated Variation in Regulatory DNA. Science. 2012. Vol. 337 no. 6099 pp. 1190-1195." The rest of the tracks were originally downloaded from the UCSC table browser. See the HelloRanges vignette for a port of the bedtools tutorial to R.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HelloRangesData")Details
| Maintainer | Michael Lawrence <lawremi@gmail.com> |
| Author | Michael Lawrence |
| License | GPL (>= 2) |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, SequencingData |
| Package Short Url | https://bioconductor.org/packages/HelloRangesData/ |
Citation
From within R, enter citation("HelloRangesData"):
Michael Lawrence. HelloRangesData: Data for the HelloRanges tutorial vignette. doi:10.18129/B9.bioc.HelloRangesData, R package version 1.38.0, https://bioconductor.org/packages/HelloRangesData.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | HelloRangesData_1.38.0.tar.gz |
Dependencies
Suggests: BiocStyle
Reverse dependencies
Suggests Me (2): HelloRanges, plyranges