evaluomeR
Evaluation of Bioinformatics Metrics
Bioconductor version: 3.23 · Package version: 1.28.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Evaluating the reliability of your own metrics and the measurements done on your own datasets by analysing the stability and goodness of the classifications of such metrics.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("evaluomeR")Details
| Maintainer | José Antonio Bernabé-Díaz <joseantonio.bernabe1@um.es> |
| Author | José Antonio Bernabé-Díaz [aut, cre], Manuel Franco [aut], Juana-María Vivo [aut], Manuel Quesada-Martínez [aut], Astrid Duque-Ramos [aut], Jesualdo Tomás Fernández-Breis [aut] |
| License | GPL-3 |
| URL | https://github.com/neobernad/evaluomeR |
| Bug Reports | https://github.com/neobernad/evaluomeR/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Classification, Clustering, FeatureExtraction, Software |
| Package Short Url | https://bioconductor.org/packages/evaluomeR/ |
Citation
From within R, enter citation("evaluomeR"):
José Antonio Bernabé-Díaz, Manuel Franco, Juana-María Vivo, Manuel Quesada-Martínez, Astrid Duque-Ramos, Jesualdo Tomás Fernández-Breis. evaluomeR: Evaluation of Bioinformatics Metrics. doi:10.18129/B9.bioc.evaluomeR, R package version 1.28.0, https://bioconductor.org/packages/evaluomeR.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | evaluomeR_1.28.0.tar.gz |
| Windows binary (x86_64) | evaluomeR_1.28.0.zip |
| macOS binary (arm64) | evaluomeR_1.28.0.tgz |
| macOS binary (x86_64) | evaluomeR_1.28.0.tgz |
Dependencies
Depends: R (>= 3.6), SummarizedExperiment, MultiAssayExperiment, cluster (>= 2.0.9), fpc (>= 2.2-3), randomForest (>= 4.6.14), flexmix (>= 2.3.15), RSKC (>= 2.4.2), sparcl (>= 1.0.4)
Imports: corrplot (>= 0.84), grDevices, graphics, reshape2, ggplot2, ggdendro, plotrix, stats, matrixStats, Rdpack, MASS, class, prabclus, mclust, kableExtra, dplyr, dendextend (>= 1.16.0)