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Visualization tools for gene fusions

Bioconductor version: Release (3.19)

chimeraviz manages data from fusion gene finders and provides useful visualization tools.

Author: Stian Lågstad [aut, cre], Sen Zhao [ctb], Andreas M. Hoff [ctb], Bjarne Johannessen [ctb], Ole Christian Lingjærde [ctb], Rolf Skotheim [ctb]

Maintainer: Stian Lågstad <stianlagstad at>

Citation (from within R, enter citation("chimeraviz")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

chimeraviz HTML R Script
Reference Manual PDF


biocViews Alignment, Infrastructure, Software
Version 1.30.0
In Bioconductor since BioC 3.5 (R-3.4) (7 years)
License Artistic-2.0
Depends Biostrings, GenomicRanges, IRanges, Gviz, S4Vectors, ensembldb, AnnotationFilter, data.table
Imports methods, grid, Rsamtools, GenomeInfoDb, GenomicAlignments, RColorBrewer, graphics, AnnotationDbi, RCircos,,, rmarkdown, graph, Rgraphviz, DT, plyr, dplyr, BiocStyle, checkmate, gtools, magick
System Requirements bowtie, samtools, and egrep are required for some functionalities
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Suggests testthat, roxygen2, devtools, knitr, lintr
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Follow Installation instructions to use this package in your R session.

Source Package chimeraviz_1.30.0.tar.gz
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macOS Binary (x86_64) chimeraviz_1.30.0.tgz
macOS Binary (arm64) chimeraviz_1.30.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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