DOI: 10.18129/B9.bioc.traseR    

This is the development version of traseR; for the stable release version, see traseR.

GWAS trait-associated SNP enrichment analyses in genomic intervals

Bioconductor version: Development (3.9)

traseR performs GWAS trait-associated SNP enrichment analyses in genomic intervals using different hypothesis testing approaches, also provides various functionalities to explore and visualize the results.

Author: Li Chen, Zhaohui S.Qin

Maintainer: li chen<li.chen at>

Citation (from within R, enter citation("traseR")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("traseR", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Perform GWAS trait-associated SNP enrichment analyses in genomic intervals
PDF   Reference Manual


biocViews Alignment, Coverage, DataImport, Genetics, QualityControl, Sequencing, Software
Version 1.13.0
In Bioconductor since BioC 3.8 (R-3.5) (< 6 months)
License GPL
Depends R (>= 3.2.0), GenomicRanges, IRanges, BSgenome.Hsapiens.UCSC.hg19
Suggests BiocStyle, RUnit, BiocGenerics
Depends On Me
Imports Me
Suggests Me
Links To Me
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