DOI: 10.18129/B9.bioc.gDRcore  

This is the development version of gDRcore; for the stable release version, see gDRcore.

Processing functions and interface to process and analyze drug dose-response data

Bioconductor version: Development (3.19)

This package contains core functions to process and analyze drug response data. The package provides tools for normalizing, averaging, and calculation of gDR metrics data. All core functions are wrapped into the pipeline function allowing analyzing the data in a straightforward way.

Author: Bartosz Czech [aut], Arkadiusz Gladki [cre, aut], Marc Hafner [aut], Pawel Piatkowski [aut], Natalia Potocka [aut], Dariusz Scigocki [aut], Janina Smola [aut], Sergiu Mocanu [aut], Allison Vuong [aut]

Maintainer: Arkadiusz Gladki <gladki.arkadiusz at>

Citation (from within R, enter citation("gDRcore")):


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biocViews ShinyApps, Software
Version 1.1.0
In Bioconductor since BioC 3.18 (R-4.3) (< 6 months)
License Artistic-2.0
Depends R (>= 4.2)
Imports BumpyMatrix, BiocParallel, checkmate, futile.logger, gDRutils(>= 0.99.28), MultiAssayExperiment, purrr, stringr, S4Vectors, SummarizedExperiment, data.table
Suggests BiocStyle, gDRstyle(>= 0.99.15), gDRimport(>= 0.99.10), gDRtestData(>= 0.99.20), IRanges, knitr, pkgbuild, qs, testthat, yaml
Depends On Me gDR
Imports Me
Suggests Me
Links To Me
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