Registration Open for Bioc2024 July 24-26


This is the development version of MouseFM; for the stable release version, see MouseFM.

In-silico methods for genetic finemapping in inbred mice

Bioconductor version: Development (3.20)

This package provides methods for genetic finemapping in inbred mice by taking advantage of their very high homozygosity rate (>95%).

Author: Matthias Munz [aut, cre] , Inken Wohlers [aut] , Hauke Busch [aut]

Maintainer: Matthias Munz <matthias.munz at>

Citation (from within R, enter citation("MouseFM")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Fetch HTML R Script
Finemapping HTML R Script
Prioritization HTML R Script
Reference Manual PDF


biocViews BiomedicalInformatics, FunctionalGenomics, GenePrediction, GeneTarget, Genetics, GenomicVariation, MathematicalBiology, MultipleComparison, PatternLogic, SNP, Software, SystemsBiology, VariantAnnotation
Version 1.15.0
In Bioconductor since BioC 3.12 (R-4.0) (3.5 years)
License GPL-3
Depends R (>= 4.0.0)
Imports httr, curl, GenomicRanges, dplyr, ggplot2, reshape2, scales, gtools, tidyr, data.table, jsonlite, rlist, GenomeInfoDb, methods, biomaRt, stats, IRanges
System Requirements
Bug Reports
See More
Suggests BiocStyle, testthat, knitr, rmarkdown
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MouseFM_1.15.0.tar.gz
Windows Binary
macOS Binary (x86_64) MouseFM_1.15.0.tgz
macOS Binary (arm64) MouseFM_1.15.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats