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IMMAN

This is the development version of IMMAN; for the stable release version, see IMMAN.

All Bioconductor versions of IMMAN

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7

Interlog protein network reconstruction by Mapping and Mining ANalysis

Bioconductor version: 3.24 · Package version: 1.33.0

Reconstructing Interlog Protein Network (IPN) integrated from several Protein protein Interaction Networks (PPINs). Using this package, overlaying different PPINs to mine conserved common networks between diverse species will be applicable.

Author: Minoo Ashtiani, Payman Nickchi, Abdollah Safari, Mehdi Mirzaie, Mohieddin Jafari

Maintainer: Minoo Ashtiani <ashtiani.minoo at gmail.com>

DOI: 10.18129/B9.bioc.IMMAN

Citation

From within R, enter citation("IMMAN"):

Minoo Ashtiani, Payman Nickchi, Abdollah Safari, Mehdi Mirzaie, Mohieddin Jafari. IMMAN: Interlog protein network reconstruction by Mapping and Mining ANalysis. doi:10.18129/B9.bioc.IMMAN, R package version 1.33.0, https://bioconductor.org/packages/IMMAN.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("IMMAN")

For older versions of R, please refer to the appropriate Bioconductor release.

Details

Version1.33.0
LicenseArtistic-2.0
Last updated2026-04-28
In Bioconductor sinceBioC 3.7 (R-3.5) (8 years)
Downloads rank1961 of 2,456
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsAlignment, GraphAndNetwork, Network, Proteomics, SequenceMatching, Software, SystemsBiology
Package Short Url https://bioconductor.org/packages/IMMAN/

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IMMAN")
IMMAN HTML R Script
Reference ManualPDF

Download

Follow the installation instructions to use this package in your R session.

Source packageIMMAN_1.33.0.tar.gz
Windows binary (x86_64)IMMAN_1.33.0.zip
macOS binary (arm64)IMMAN_1.33.0.tgz
macOS binary (x86_64)IMMAN_1.33.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/IMMAN
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/IMMAN
Package Downloads ReportDownload Stats
Dependencies

Imports: STRINGdb, pwalign, igraph, graphics, utils, seqinr

Suggests: knitr, rmarkdown, testthat