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AnVILVRS

This is the development version of AnVILVRS; to use it, please install the devel version of Bioconductor.

Expose the vrs_anvil_toolkit Python package via R

DOI: 10.18129/B9.bioc.AnVILVRS

Bioconductor version: Development (3.24)

Process Variant Call Format (VCF) files and perform lookup operations on Genomic Variation Representation Service (GA4GH VRS) identifiers. The GA4GH VRS identifiers provide a standardized way to represent genomic variations, making it easier to exchange and share genomic information.

Author: Marcel Ramos [aut, cre] ORCID: 0000-0002-3242-0582

Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>

Citation (from within R, enter citation("AnVILVRS")):

Marcel Ramos. AnVILVRS: Expose the vrs_anvil_toolkit Python package via R. doi:10.18129/B9.bioc.AnVILVRS, R package version 0.99.19, https://bioconductor.org/packages/AnVILVRS.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("AnVILVRS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AnVILVRS")

Details

Package Archives

Follow Installation instructions to use this package in your R session.