tweeDEseqCountData

This is the released version of tweeDEseqCountData; for the devel version, see tweeDEseqCountData.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9

RNA-seq count data employed in the vignette of the tweeDEseq package

Bioconductor version: Release (3.23)

RNA-seq count data from Pickrell et al. (2010) employed to illustrate the use of the Poisson-Tweedie family of distributions with the tweeDEseq package.

Author: Dolors Pelegri-Siso [aut, cre] ORCID: 0000-0002-5993-3003 , Juan R. Gonzalez [aut] ORCID: 0000-0003-3267-2146 , Mikel Esnaola [aut], Robert Castelo [aut]

Maintainer: Dolors Pelegri-Siso <dolors.pelegri at isglobal.org>

Citation (from within R, enter citation("tweeDEseqCountData")):

Dolors Pelegri-Siso, Juan R. Gonzalez, Mikel Esnaola, Robert Castelo. tweeDEseqCountData: RNA-seq count data employed in the vignette of the tweeDEseq package. doi:10.18129/B9.bioc.tweeDEseqCountData, R package version 1.50.0, https://bioconductor.org/packages/tweeDEseqCountData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("tweeDEseqCountData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("tweeDEseqCountData")

RNA-seq count data employed in the vignette of the tweeDEseq package	HTML	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, Genome, Homo_sapiens_Data, RNASeqData
Version	1.50.0
In Bioconductor since	BioC 2.9 (R-2.14) (15 years)
License	MIT + file LICENSE
Depends	Biobase, R (>= 4.3.0)
Imports
System Requirements
URL	https://github.com/isglobal-brge/tweeDEseqCountData/
Bug Reports	https://github.com/isglobal-brge/tweeDEseqCountData/issues

Suggests	knitr, BiocStyle, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	GSAR, missMethyl, tweeDEseq, zenith
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	tweeDEseqCountData_1.50.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/tweeDEseqCountData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/tweeDEseqCountData
Package Short Url	https://bioconductor.org/packages/tweeDEseqCountData/
Package Downloads Report	Download Stats