octad.db
Open Cancer TherApeutic Discovery (OCTAD) database
Bioconductor version: 3.23 · Package version: 1.14.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Open Cancer TherApeutic Discovery (OCTAD) package implies sRGES approach for the drug discovery. The essential idea is to identify drugs that reverse the gene expression signature of a disease by tamping down over-expressed genes and stimulating weakly expressed ones. The following package contains all required precomputed data for whole OCTAD pipeline computation.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("octad.db")Details
| Maintainer | E. Chekalin <eygen.chekalin@gmail.com> |
| Author | E. Chekalin [aut, cre], S. Paithankar [aut], B. Zeng [aut], B. Glicksberg [ctb], P. Newbury [ctb], J. Xing [ctb], K. Liu [ctb], A. Wen [ctb], D. Joseph [ctb], B. Chen [aut] |
| License | Artistic-2.0 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | CancerData, ExperimentData, ExperimentHub, ExpressionData, SequencingData |
| Package Short Url | https://bioconductor.org/packages/octad.db/ |
Citation
From within R, enter citation("octad.db"):
E. Chekalin, S. Paithankar, B. Zeng, B. Chen. octad.db: Open Cancer TherApeutic Discovery (OCTAD) database. doi:10.18129/B9.bioc.octad.db, R package version 1.14.0, https://bioconductor.org/packages/octad.db.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | octad.db_1.14.0.tar.gz |
Reverse dependencies
Depends On Me (1): octad