derfinderData

DOI: 10.18129/B9.bioc.derfinderData    

Processed BigWigs from BrainSpan for examples

Bioconductor version: Release (3.12)

Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.

Author: Leonardo Collado-Torres [aut, cre] , Andrew Jaffe [aut] , Jeffrey Leek [aut, ths]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("derfinderData")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("derfinderData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("derfinderData")

 

HTML R Script Introduction to derfinderData
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, Homo_sapiens_Data, RNASeqData
Version 2.7.1
License Artistic-2.0
Depends R (>= 3.1.1)
Imports
LinkingTo
Suggests sessioninfo, knitcitations (>= 1.0.1), knitr (>= 1.6), RefManageR, rmarkdown (>= 0.3.3), BiocStyle
SystemRequirements
Enhances
URL https://github.com/leekgroup/derfinderData
BugReports https://github.com/leekgroup/derfinderData/issues
Depends On Me
Imports Me
Suggests Me derfinder, derfinderPlot
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package derfinderData_2.7.1.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/derfinderData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/derfinderData
Package Short Url https://bioconductor.org/packages/derfinderData/
Package Downloads Report Download Stats

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