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Fletcher2013b

Master regulators of FGFR2 signalling and breast cancer risk


Bioconductor version: Release (3.18)

This package reproduces the systems biology analysis for the data in package Fletcher2013a using RTN.

Author: Mauro Castro, Michael Fletcher, Florian Markowetz and Kerstin Meyer.

Maintainer: Mauro Castro <mauro.a.castro at gmail.com>

Citation (from within R, enter citation("Fletcher2013b")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Fletcher2013b")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Fletcher2013b")
Main vignette:Fletcher2013b PDF R Script
Reference Manual PDF

Details

biocViews BreastCancerData, CancerData, ChIPSeqData, ExperimentData, SNPData
Version 1.38.0
License GPL (>= 2)
Depends R (>= 2.15), Fletcher2013a, RTN(>= 1.1.2), RedeR(>= 1.8.1), igraph
Imports RColorBrewer
System Requirements
URL http://dx.doi.org/10.1038/ncomms3464
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Suggests Me geneplast, RTNsurvival
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Fletcher2013b_1.38.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/Fletcher2013b
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Fletcher2013b
Package Short Url https://bioconductor.org/packages/Fletcher2013b/
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