EGSEAdata
Gene set collections for the EGSEA package
Bioconductor version: 3.23 · Package version: 1.40.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("EGSEAdata")Details
| Maintainer | Monther Alhamdoosh <m.hamdoosh@gmail.com> |
| Author | Monther Alhamdoosh, Yifang Hu and Gordon K. Smyth |
| License | file LICENSE |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data |
| Package Short Url | https://bioconductor.org/packages/EGSEAdata/ |
Citation
From within R, enter citation("EGSEAdata"):
Monther Alhamdoosh, Yifang Hu and Gordon K. Smyth. EGSEAdata: Gene set collections for the EGSEA package. doi:10.18129/B9.bioc.EGSEAdata, R package version 1.40.0, https://bioconductor.org/packages/EGSEAdata.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | EGSEAdata_1.40.0.tar.gz |
Reverse dependencies
Imports Me (1): EGSEA