• Home
• Bioconductor 3.23
• Annotation Packages
• GenomicState

GenomicState

This is the released version of GenomicState; for the devel version, see GenomicState.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10

Build and access GenomicState objects for use with derfinder tools from sources like Gencode

DOI: 10.18129/B9.bioc.GenomicState

Bioconductor version: Release (3.23)

This package contains functions for building GenomicState objects from different annotation sources such as Gencode. It also provides access to these files at JHPCE.

Author: Leonardo Collado-Torres [aut, cre] ORCID: 0000-0003-2140-308X

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("GenomicState")):

Leonardo Collado-Torres. GenomicState: Build and access GenomicState objects for use with derfinder tools from sources like Gencode. doi:10.18129/B9.bioc.GenomicState, R package version 0.99.17, https://bioconductor.org/packages/GenomicState.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GenomicState")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GenomicState")

Details

Package Archives

Follow Installation instructions to use this package in your R session.