DOI: 10.18129/B9.bioc.ptairMS  

Pre-processing PTR-TOF-MS Data

Bioconductor version: Release (3.18)

This package implements a suite of methods to preprocess data from PTR-TOF-MS instruments (HDF5 format) and generates the 'sample by features' table of peak intensities in addition to the sample and feature metadata (as a singl

Author: camille Roquencourt [aut, cre]

Maintainer: camille Roquencourt <camille.roquencourt at>

Citation (from within R, enter citation("ptairMS")):


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HTML R Script ptaiMS: Processing and analysis of PTR-TOF-MS data
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biocViews Alignment, MassSpectrometry, Metabolomics, PeakDetection, Preprocessing, Software
Version 1.10.0
In Bioconductor since BioC 3.13 (R-4.1) (2.5 years)
License GPL-3
Imports Biobase, bit64, chron, data.table, doParallel, DT, enviPat, foreach, ggplot2, graphics, grDevices, ggpubr, gridExtra, Hmisc, methods, minpack.lm, MSnbase, parallel, plotly, rhdf5, rlang, Rcpp, shiny, shinyscreenshot, signal, scales, stats, utils
LinkingTo Rcpp
Suggests knitr, rmarkdown, BiocStyle, testthat (>= 2.1.0), ptairData, ropls
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