pandaR
PANDA Algorithm
Bioconductor version: 3.23 · Package version: 1.44.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Runs PANDA, an algorithm for discovering novel network structure by combining information from multiple complementary data sources.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("pandaR")Details
| Maintainer | Joseph N. Paulson <paulson.joseph@gene.com>, Dan Schlauch <dschlauch@genospace.com> |
| Author | Dan Schlauch, Joseph N. Paulson, Albert Young, John Quackenbush, Kimberly Glass |
| License | GPL-2 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | GeneExpression, GeneRegulation, GraphAndNetwork, Microarray, Network, NetworkInference, Software, StatisticalMethod, Transcription |
| Package Short Url | https://bioconductor.org/packages/pandaR/ |
Citation
From within R, enter citation("pandaR"):
Dan Schlauch, Joseph N. Paulson, Albert Young, John Quackenbush, Kimberly Glass. pandaR: PANDA Algorithm. doi:10.18129/B9.bioc.pandaR, R package version 1.44.0, https://bioconductor.org/packages/pandaR.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | pandaR_1.44.0.tar.gz |
| Windows binary (x86_64) | pandaR_1.43.0.zip |
| macOS binary (arm64) | pandaR_1.44.0.tgz |
| macOS binary (x86_64) | pandaR_1.44.0.tgz |
Dependencies
Depends: R (>= 3.0.0), methods, Biobase, BiocGenerics
Imports: matrixStats, igraph, ggplot2, grid, reshape, plyr, RUnit, hexbin
Reverse dependencies
Depends On Me (1): netZooR