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occugene

This is the released version of occugene; for the devel version, see occugene.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Functions for Multinomial Occupancy Distribution


Bioconductor version: Release (3.23)

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Author: Oliver Will <oliverrreader at gmail.com>

Maintainer: Oliver Will <oliverrreader at gmail.com>

Citation (from within R, enter citation("occugene")):

Oliver Will. occugene: Functions for Multinomial Occupancy Distribution. doi:10.18129/B9.bioc.occugene, R package version 1.72.0, https://bioconductor.org/packages/occugene.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("occugene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("occugene")
occugene PDF R Script
Reference ManualPDF

Details

biocViews Annotation, Pathways, Software
Version1.72.0
In Bioconductor sinceBioC 2.2 (R-2.7) (18.5 years)
License GPL (>= 2)
Depends R (>= 2.0.0)
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package occugene_1.72.0.tar.gz
Windows Binary (x86_64) occugene_1.72.0.zip
macOS Binary (big-sur-x86_64) occugene_1.72.0.tgz
macOS Binary (sonoma-arm64) occugene_1.72.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/occugene
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/occugene
Package Short Url https://bioconductor.org/packages/occugene/
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