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flowPeaks

This is the released version of flowPeaks; for the devel version, see flowPeaks.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11

An R package for flow data clustering


Bioconductor version: Release (3.23)

A fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means.

Author: Yongchao Ge<yongchao.ge at gmail.com>

Maintainer: Yongchao Ge<yongchao.ge at gmail.com>

Citation (from within R, enter citation("flowPeaks")):

Yongchao Ge. flowPeaks: An R package for flow data clustering. doi:10.18129/B9.bioc.flowPeaks, R package version 1.58.0, https://bioconductor.org/packages/flowPeaks.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowPeaks")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowPeaks")
Tutorial of flowPeaks package PDF R Script
Reference ManualPDF
READMEText

Details

biocViews Clustering, FlowCytometry, Gating, ImmunoOncology, Software
Version1.58.0
In Bioconductor sinceBioC 2.11 (R-2.15) (14 years)
License Artistic-1.0
Depends R (>= 2.12.0)
Imports
System Requirementsgsl
URL
See More
Suggests flowCore
Linking To
Enhances
Depends On Me
Imports Me CONFESS, ddPCRclust, Polytect
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowPeaks_1.58.0.tar.gz
Windows Binary (x86_64) flowPeaks_1.58.0.zip
macOS Binary (big-sur-x86_64) flowPeaks_1.58.0.tgz
macOS Binary (sonoma-arm64) flowPeaks_1.58.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/flowPeaks
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/flowPeaks
Package Short Url https://bioconductor.org/packages/flowPeaks/
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