crisprVerse
This is the released version of crisprVerse; for the devel version, see crisprVerse.
Easily install and load the crisprVerse ecosystem for CRISPR gRNA design
Bioconductor version: Release (3.23)
The crisprVerse is a modular ecosystem of R packages developed for the design and manipulation of CRISPR guide RNAs (gRNAs). All packages share a common language and design principles. This package is designed to make it easy to install and load the crisprVerse packages in a single step. To learn more about the crisprVerse, visit <https://www.github.com/crisprVerse>.
Author: Jean-Philippe Fortin [aut, cre]
Maintainer: Jean-Philippe Fortin <fortin946 at gmail.com>
citation("crisprVerse")):Jean-Philippe Fortin. crisprVerse: Easily install and load the crisprVerse ecosystem for CRISPR gRNA design. doi:10.18129/B9.bioc.crisprVerse, R package version 1.14.0, https://bioconductor.org/packages/crisprVerse.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("crisprVerse")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("crisprVerse")| crisprVerse | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | CRISPR, FunctionalGenomics, GeneTarget, Software |
| Version | 1.14.0 |
| In Bioconductor since | BioC 3.16 (R-4.2) (4 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 4.2.0) |
| Imports | BiocManager, cli, crisprBase, crisprBowtie, crisprScore, crisprScoreData, crisprDesign, crisprViz, rlang, tools, utils |
| System Requirements | |
| URL | https://github.com/crisprVerse/crisprVerse |
| Bug Reports | https://github.com/crisprVerse/crisprVerse/issues |
See More
| Suggests | BiocStyle, knitr, testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report, r-universe |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | crisprVerse_1.14.0.tar.gz |
| Windows Binary (x86_64) | crisprVerse_1.14.0.zip |
| macOS Binary (big-sur-x86_64) | crisprVerse_1.14.0.tgz |
| macOS Binary (sonoma-arm64) | crisprVerse_1.14.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/crisprVerse |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/crisprVerse |
| Package Short Url | https://bioconductor.org/packages/crisprVerse/ |
| Package Downloads Report | Download Stats |