cqn
Conditional quantile normalization
Bioconductor version: 3.23 · Package version: 1.58.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
A normalization tool for RNA-Seq data, implementing the conditional quantile normalization method.
DOI: 10.18129/B9.bioc.cqn
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("cqn")Details
| Maintainer | Kasper Daniel Hansen <kasperdanielhansen@gmail.com> |
| Author | Jean (Zhijin) Wu, Kasper Daniel Hansen |
| License | Artistic-2.0 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | DifferentialExpression, ImmunoOncology, Preprocessing, RNASeq, Software |
| Package Short Url | https://bioconductor.org/packages/cqn/ |
Citation
From within R, enter citation("cqn"):
Jean Wu, Kasper Daniel Hansen. cqn: Conditional quantile normalization. doi:10.18129/B9.bioc.cqn, R package version 1.58.0, https://bioconductor.org/packages/cqn.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | cqn_1.58.0.tar.gz |
| Windows binary (x86_64) | cqn_1.58.0.zip |
| macOS binary (arm64) | cqn_1.58.0.tgz |
| macOS binary (x86_64) | cqn_1.58.0.tgz |