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basilisk.utils

Centralized Conda Installation for Bioconductor Packages

Bioconductor version: 3.23 · Package version: 1.24.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

Provides a centralized conda installation for use by other Bioconductor packages. If conda is not already available on the system, it is downloaded and installed from the Miniforge project; otherwise, no action is performed. Historically, this package was used to provide a Python installation for basilisk, hence the name.

DOI: 10.18129/B9.bioc.basilisk.utils

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("basilisk.utils")

Details

MaintainerAaron Lun <infinite.monkeys.with.keyboards@gmail.com>
AuthorAaron Lun [aut, cre, cph]
LicenseGPL-3
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsInfrastructure, Software
Package Short Url https://bioconductor.org/packages/basilisk.utils/

Citation

From within R, enter citation("basilisk.utils"):

Aaron Lun. basilisk.utils: Centralized Conda Installation for Bioconductor Packages. doi:10.18129/B9.bioc.basilisk.utils, R package version 1.24.0, https://bioconductor.org/packages/basilisk.utils.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagebasilisk.utils_1.24.0.tar.gz
Windows binary (x86_64)basilisk.utils_1.24.0.zip
macOS binary (arm64)basilisk.utils_1.24.0.tgz
macOS binary (x86_64)basilisk.utils_1.24.0.tgz
Dependencies

Imports: utils, methods, tools, dir.expiry

Suggests: knitr, rmarkdown, BiocStyle, testthat

Reverse dependencies

Imports Me (2): HiCool, scifer

Suggests Me (1): Ibex