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basilisk.utils

Basilisk Installation Utilities


Bioconductor version: Release (3.18)

Implements utilities for installation of the basilisk package, primarily for creation of the underlying Conda instance. This allows us to avoid re-writing the same R code in both the configure script (for centrally administered R installations) and in the lazy installation mechanism (for distributed package binaries). It is highly unlikely that developers - or, heaven forbid, end-users! - will need to interact with this package directly; they should be using the basilisk package instead.

Author: Aaron Lun [aut, cre, cph]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("basilisk.utils")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("basilisk.utils")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("basilisk.utils")
_basilisk_ installation utilities HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Infrastructure, Software
Version 1.14.1
In Bioconductor since BioC 3.11 (R-4.0) (4 years)
License GPL-3
Depends
Imports utils, methods, tools, dir.expiry
System Requirements
URL
See More
Suggests reticulate, knitr, rmarkdown, BiocStyle, testthat, basilisk
Linking To
Enhances
Depends On Me
Imports Me basilisk, crisprScore
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package basilisk.utils_1.14.1.tar.gz
Windows Binary basilisk.utils_1.14.1.zip
macOS Binary (x86_64) basilisk.utils_1.14.1.tgz
macOS Binary (arm64) basilisk.utils_1.14.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/basilisk.utils
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/basilisk.utils
Bioc Package Browser https://code.bioconductor.org/browse/basilisk.utils/
Package Short Url https://bioconductor.org/packages/basilisk.utils/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.18 Source Archive