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SUITOR

This is the released version of SUITOR; for the devel version, see SUITOR.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16

Selecting the number of mutational signatures through cross-validation

DOI: 10.18129/B9.bioc.SUITOR

Bioconductor version: Release (3.23)

An unsupervised cross-validation method to select the optimal number of mutational signatures. A data set of mutational counts is split into training and validation data.Signatures are estimated in the training data and then used to predict the mutations in the validation data.

Author: DongHyuk Lee [aut], Bin Zhu [aut], Bill Wheeler [cre]

Maintainer: Bill Wheeler <wheelerb at imsweb.com>

Citation (from within R, enter citation("SUITOR")):

DongHyuk Lee, Bin Zhu. SUITOR: Selecting the number of mutational signatures through cross-validation. doi:10.18129/B9.bioc.SUITOR, R package version 1.14.0, https://bioconductor.org/packages/SUITOR.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SUITOR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SUITOR")

Details

Package Archives

Follow Installation instructions to use this package in your R session.