DOI: 10.18129/B9.bioc.Rvisdiff  

Interactive Graphs for Differential Expression

Bioconductor version: Release (3.18)

Creates a muti-graph web page which allows the interactive exploration of differential expression results. The graphical web interface presents results as a table which is integrated with five interactive graphs: MA-plot, volcano plot, box plot, lines plot and cluster heatmap. Graphical aspect and information represented in the graphs can be customized by means of user controls. Final graphics can be exported as PNG format.

Author: Carlos Prieto [aut] , David Barrios [cre, aut]

Maintainer: David Barrios <metal at usal.es>

Citation (from within R, enter citation("Rvisdiff")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


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HTML R Script Visualize Differential Expression results
PDF   Reference Manual
Text   NEWS


biocViews DataRepresentation, DifferentialExpression, RNASeq, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 3.18 (R-4.3) (< 6 months)
License GPL-2 | GPL-3
Depends R (>= 4.3.0)
Imports edgeR, utils
Suggests knitr, rmarkdown, DESeq2, limma, SummarizedExperiment, airway, BiocStyle, matrixTests, BiocManager
URL https://github.com/BioinfoUSAL/Rvisdiff/
BugReports https://github.com/BioinfoUSAL/Rvisdiff/issues/
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Follow Installation instructions to use this package in your R session.

Source Package Rvisdiff_1.0.0.tar.gz
Windows Binary Rvisdiff_1.0.0.zip
macOS Binary (x86_64) Rvisdiff_1.0.0.tgz
macOS Binary (arm64) Rvisdiff_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rvisdiff
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rvisdiff
Bioc Package Browser https://code.bioconductor.org/browse/Rvisdiff/
Package Short Url https://bioconductor.org/packages/Rvisdiff/
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Old Source Packages for BioC 3.18 Source Archive

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