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MANOR

CGH Micro-Array NORmalization


Bioconductor version: Release (3.18)

Importation, normalization, visualization, and quality control functions to correct identified sources of variability in array-CGH experiments.

Author: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>, Philippe Hupé <philippe.hupe at curie.fr>

Maintainer: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>

Citation (from within R, enter citation("MANOR")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MANOR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MANOR")
Overview of the MANOR package HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews CopyNumberVariation, DataImport, Microarray, Normalization, Preprocessing, QualityControl, Software, TwoChannel
Version 1.74.0
In Bioconductor since BioC 1.7 (R-2.2) (18.5 years)
License GPL-2
Depends R (>= 2.10)
Imports GLAD, graphics, grDevices, stats, utils
System Requirements
URL http://bioinfo.curie.fr/projects/manor/index.html
Bug Reports https://github.com/pneuvial/MANOR/issues
See More
Suggests knitr, rmarkdown, bookdown
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MANOR_1.74.0.tar.gz
Windows Binary MANOR_1.74.0.zip
macOS Binary (x86_64) MANOR_1.74.0.tgz
macOS Binary (arm64) MANOR_1.74.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MANOR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MANOR
Bioc Package Browser https://code.bioconductor.org/browse/MANOR/
Package Short Url https://bioconductor.org/packages/MANOR/
Package Downloads Report Download Stats