GLAD
Gain and Loss Analysis of DNA
Bioconductor version: 3.23 · Package version: 2.76.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Analysis of array CGH data : detection of breakpoints in genomic profiles and assignment of a status (gain, normal or loss) to each chromosomal regions identified.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GLAD")Details
| Maintainer | Philippe Hupe <glad@curie.fr> |
| Author | Philippe Hupe |
| License | GPL-2 |
| URL | http://bioinfo.curie.fr |
| System Requirements | gsl. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'. |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | CopyNumberVariation, Microarray, Software |
| Package Short Url | https://bioconductor.org/packages/GLAD/ |
Citation
From within R, enter citation("GLAD"):
Philippe Hupe. GLAD: Gain and Loss Analysis of DNA. doi:10.18129/B9.bioc.GLAD, R package version 2.76.0, https://bioconductor.org/packages/GLAD.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | GLAD_2.76.0.tar.gz |
| Windows binary (x86_64) | GLAD_2.76.0.zip |
| macOS binary (arm64) | GLAD_2.76.0.tgz |
| macOS binary (x86_64) | GLAD_2.76.0.tgz |
Reverse dependencies
Depends On Me (1): ITALICS
Imports Me (2): ITALICS, MANOR
Suggests Me (2): aroma.cn, aroma.core