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Code for using BridgeDb identifier mapping framework from within R

Bioconductor version: Release (3.19)

Use BridgeDb functions and load identifier mapping databases in R. It uses GitHub, Zenodo, and Figshare if you use this package to download identifier mappings files.

Author: Christ Leemans <christleemans at>, Egon Willighagen <egon.willighagen at>, Denise Slenter, Anwesha Bohler <anweshabohler at>, Lars Eijssen <l.eijssen at>, Tooba Abbassi-Daloii

Maintainer: Egon Willighagen <egon.willighagen at>

Citation (from within R, enter citation("BridgeDbR")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Tutorial HTML R Script
Reference Manual PDF


biocViews Annotation, Cheminformatics, Metabolomics, Software
Version 2.14.0
In Bioconductor since BioC 3.0 (R-3.1) (10 years)
License AGPL-3
Depends R (>= 3.3.0), rJava
Imports curl
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Suggests BiocStyle, knitr, rmarkdown, testthat
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Follow Installation instructions to use this package in your R session.

Source Package BridgeDbR_2.14.0.tar.gz
Windows Binary
macOS Binary (x86_64) BridgeDbR_2.14.0.tgz
macOS Binary (arm64) BridgeDbR_2.14.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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