BridgeDbR

DOI: 10.18129/B9.bioc.BridgeDbR    

This is the development version of BridgeDbR; to use it, please install the devel version of Bioconductor.

Code for using BridgeDb identifier mapping framework from within R

Bioconductor version: Development (3.10)

Use BridgeDb functions and load identifier mapping databases in R.

Author: Christ Leemans <christleemans at gmail.com>, Egon Willighagen <egon.willighagen at gmail.com>, Anwesha Bohler <anweshabohler at gmail.com>, Lars Eijssen <l.eijssen at maastrichtuniversity.nl>

Maintainer: Egon Willighagen <egon.willighagen at gmail.com>

Citation (from within R, enter citation("BridgeDbR")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BridgeDbR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BridgeDbR")

 

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Details

biocViews Annotation, Cheminformatics, Metabolomics, Software
Version 1.19.0
In Bioconductor since BioC 3.0 (R-3.1) (5 years)
License AGPL-3
Depends R (>= 3.3.0), rJava
Imports RCurl
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL https://github.com/bridgedb/BridgeDbR
BugReports https://github.com/bridgedb/BridgeDbR/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BridgeDbR_1.19.0.tar.gz
Windows Binary BridgeDbR_1.19.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) BridgeDbR_1.19.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BridgeDbR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BridgeDbR
Package Short Url http://bioconductor.org/packages/BridgeDbR/
Package Downloads Report Download Stats

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