Welcome to the new bioconductor.org!

BAGS

A Bayesian Approach for Geneset Selection


Bioconductor version: Release (3.18)

R package providing functions to perform geneset significance analysis over simple cross-sectional data between 2 and 5 phenotypes of interest.

Author: Alejandro Quiroz-Zarate

Maintainer: Alejandro Quiroz-Zarate <aquiroz at jimmy.harvard.edu>

Citation (from within R, enter citation("BAGS")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BAGS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BAGS")
BAGS: A Bayesian Approach for Geneset Selection. PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Bayesian, Software
Version 2.42.0
In Bioconductor since BioC 2.13 (R-3.0) (10.5 years)
License Artistic-2.0
Depends R (>= 2.10), breastCancerVDX, Biobase
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BAGS_2.42.0.tar.gz
Windows Binary BAGS_2.42.0.zip (64-bit only)
macOS Binary (x86_64) BAGS_2.42.0.tgz
macOS Binary (arm64) BAGS_2.42.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/BAGS
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BAGS
Bioc Package Browser https://code.bioconductor.org/browse/BAGS/
Package Short Url https://bioconductor.org/packages/BAGS/
Package Downloads Report Download Stats