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proteinProfiles

This is the released version of proteinProfiles; for the devel version, see proteinProfiles.

Protein Profiling


Bioconductor version: Release (3.23)

Significance assessment for distance measures of time-course protein profiles

Author: Julian Gehring

Maintainer: Julian Gehring <jg-bioc at gmx.com>

Citation (from within R, enter citation("proteinProfiles")):
Seminal Bioconductor project articles:

Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.

Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("proteinProfiles")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("proteinProfiles")
The proteinProfiles package PDF R Script
Reference Manual PDF

Details

biocViews Software
Version 1.52.0
In Bioconductor since BioC 2.12 (R-3.0) (13.5 years)
License GPL-3
Depends R (>= 2.15.2)
Imports graphics, stats
System Requirements
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package proteinProfiles_1.52.0.tar.gz
Windows Binary (x86_64) proteinProfiles_1.52.0.zip
macOS Binary (big-sur-x86_64) proteinProfiles_1.52.0.tgz
macOS Binary (sonoma-arm64) proteinProfiles_1.52.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/proteinProfiles
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/proteinProfiles
Bioc Package Browser https://code.bioconductor.org/browse/proteinProfiles/
Package Short Url https://bioconductor.org/packages/proteinProfiles/
Package Downloads Report Download Stats