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metabomxtr

This is the released version of metabomxtr; for the devel version, see metabomxtr.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0

A package to run mixture models for truncated metabolomics data with normal or lognormal distributions


Bioconductor version: Release (3.23)

The functions in this package return optimized parameter estimates and log likelihoods for mixture models of truncated data with normal or lognormal distributions.

Author: Michael Nodzenski, Anna Reisetter, Denise Scholtens

Maintainer: Michael Nodzenski <michael.nodzenski at gmail.com>

Citation (from within R, enter citation("metabomxtr")):

Michael Nodzenski, Anna Reisetter, Denise Scholtens. metabomxtr: A package to run mixture models for truncated metabolomics data with normal or lognormal distributions. doi:10.18129/B9.bioc.metabomxtr, R package version 1.46.0, https://bioconductor.org/packages/metabomxtr.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("metabomxtr")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metabomxtr")
metabomxtr PDF R Script
mixnorm PDF R Script
Reference ManualPDF
NEWSText

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version1.46.0
In Bioconductor sinceBioC 3.0 (R-3.1) (12 years)
License GPL-2
Depends methods, Biobase
Imports optimx, Formula, plyr, multtest, BiocParallel, ggplot2
System Requirements
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Suggests xtable, reshape2
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Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package metabomxtr_1.46.0.tar.gz
Windows Binary (x86_64) metabomxtr_1.46.0.zip
macOS Binary (big-sur-x86_64) metabomxtr_1.46.0.tgz
macOS Binary (sonoma-arm64) metabomxtr_1.46.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/metabomxtr
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/metabomxtr
Package Short Url https://bioconductor.org/packages/metabomxtr/
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