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globaltest

This is the released version of globaltest; for the devel version, see globaltest.

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Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing

DOI: 10.18129/B9.bioc.globaltest

Bioconductor version: Release (3.23)

The global test tests groups of covariates (or features) for association with a response variable. This package implements the test with diagnostic plots and multiple testing utilities, along with several functions to facilitate the use of this test for gene set testing of GO and KEGG terms.

Author: Jelle Goeman and Jan Oosting, with contributions by Livio Finos, Aldo Solari, Dominic Edelmann

Maintainer: Jelle Goeman <j.j.goeman at lumc.nl>

Citation (from within R, enter citation("globaltest")):

Jelle Goeman and Jan Oosting, with contributions by Livio Finos, Aldo Solari, Dominic Edelmann. globaltest: Testing Groups of Covariates/Features for Association with a Response Variable, with Applications to Gene Set Testing. doi:10.18129/B9.bioc.globaltest, R package version 5.66.0, https://bioconductor.org/packages/globaltest.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("globaltest")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("globaltest")

Details

Package Archives

Follow Installation instructions to use this package in your R session.