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seq2pathway.data

This is the development version of seq2pathway.data; for the stable release version, see seq2pathway.data.

data set for R package seq2pathway


Bioconductor version: Development (3.19)

Supporting data for the seq2patheway package. Includes modified gene sets from MsigDB and org.Hs.eg.db; gene locus definitions from GENCODE project.

Author: Bin Wang <binw at uchicago.edu>

Maintainer: Arjun Kinstlick <akinstlick at uchicago.edu>

Citation (from within R, enter citation("seq2pathway.data")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("seq2pathway.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("seq2pathway.data")
An R data package for sequence PDF
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData
Version 1.35.0
License GPL (>= 2)
Depends R (>= 3.6.2)
Imports
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Imports Me seq2pathway
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package seq2pathway.data_1.35.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/seq2pathway.data
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/seq2pathway.data
Package Short Url https://bioconductor.org/packages/seq2pathway.data/
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