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mammaPrintData

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This is the development version of mammaPrintData; for the stable release version, see mammaPrintData.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

RGLists from the Glas and Buyse breast cancer studies


Bioconductor version: Development (3.24)

Gene expression data for the two breast cancer cohorts published by Glas and Buyse in 2006. This cohorts were used to implement and validate the mammaPrint breast cancer test.

Author: Luigi Marchionni <marchion at jhu.edu>

Maintainer: Luigi Marchionni <marchion at jhu.edu>

Citation (from within R, enter citation("mammaPrintData")):

Luigi Marchionni. mammaPrintData: RGLists from the Glas and Buyse breast cancer studies. doi:10.18129/B9.bioc.mammaPrintData, R package version 1.49.1, https://bioconductor.org/packages/mammaPrintData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("mammaPrintData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mammaPrintData")
Working with the mammaPrintData package PDF R Script
Reference ManualPDF

Details

biocViews BreastCancerData, CancerData, ExperimentData, ExpressionData, MicroarrayData, TwoChannelData
Version1.49.1
In Bioconductor sinceBioC 2.13 (R-3.0) (13 years)
License Artistic-2.0
Depends R (>= 2.13.0)
Imports
System Requirements
URLhttp://luigimarchionni.org/breastTSP.html
See More
Suggests Biobase, readxl, limma
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mammaPrintData_1.49.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/mammaPrintData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/mammaPrintData
Package Short Url https://bioconductor.org/packages/mammaPrintData/
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