Bioconductor Developer Survey 2026 Now Open!

dyebiasexamples

This is the development version of dyebiasexamples; for the stable release version, see dyebiasexamples.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Example data for the dyebias package, which implements the GASSCO method.


Bioconductor version: Development (3.24)

Data for the dyebias package, consisting of 4 self-self hybrizations of self-spotted yeast slides, as well as data from Array Express accession E-MTAB-32

Author: Philip Lijnzaad and Thanasis Margaritis

Maintainer: Philip Lijnzaad <plijnzaad at gmail.com>

Citation (from within R, enter citation("dyebiasexamples")):

Philip Lijnzaad and Thanasis Margaritis. dyebiasexamples: Example data for the dyebias package, which implements the GASSCO method. doi:10.18129/B9.bioc.dyebiasexamples, R package version 1.53.0, https://bioconductor.org/packages/dyebiasexamples.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("dyebiasexamples")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF
LICENSEText

Details

biocViews ArrayExpress, CGHData, ExperimentData, MicroarrayData, SAGEData, TwoChannelData
Version1.53.0
In Bioconductor sinceBioC 2.5 (R-2.10) or earlier (> 17 years)
License GPL-3
Depends R (>= 1.4.1), marray, GEOquery
Imports
System Requirements
URLhttp://www.holstegelab.nl/publications/margaritis_lijnzaad
See More
Suggests dyebias, convert, Biobase
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me dyebias
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package dyebiasexamples_1.53.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/dyebiasexamples
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/dyebiasexamples
Package Short Url https://bioconductor.org/packages/dyebiasexamples/
Package Downloads ReportDownload Stats