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TBX20BamSubset

This is the development version of TBX20BamSubset; for the stable release version, see TBX20BamSubset.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12

Subset of BAM files from the "TBX20" experiment


Bioconductor version: Development (3.24)

Dual transcriptional activator and repressor roles of TBX20 regulate adult cardiac structure and function. A subset of the RNA-Seq data.

Author: D. Bindreither

Maintainer: D. Bindreither <daniel.bindreither at gmail.com>

Citation (from within R, enter citation("TBX20BamSubset")):

D. Bindreither. TBX20BamSubset: Subset of BAM files from the "TBX20" experiment. doi:10.18129/B9.bioc.TBX20BamSubset, R package version 1.49.0, https://bioconductor.org/packages/TBX20BamSubset.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("TBX20BamSubset")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TBX20BamSubset")
TBX20 RNA-Seq data subset PDF R Script
Reference ManualPDF

Details

biocViews ExperimentData, RNASeqData, SequencingData
Version1.49.0
In Bioconductor sinceBioC 2.12 (R-3.0) (13.5 years)
License LGPL
Depends Rsamtools (>= 1.9.8)
Imports xtable
System Requirements
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Depends On Me
Imports Me Rmmquant
Suggests Me magpie
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Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TBX20BamSubset_1.49.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/TBX20BamSubset
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/TBX20BamSubset
Package Short Url https://bioconductor.org/packages/TBX20BamSubset/
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