Hiiragi2013

This is the development version of Hiiragi2013; for the stable release version, see Hiiragi2013.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13

Cell-to-cell expression variability followed by signal reinforcement progressively segregates early mouse lineages

Bioconductor version: Development (3.24)

This package contains the experimental data and a complete executable transcript (vignette) of the statistical analysis presented in the paper "Cell-to-cell expression variability followed by signal reinforcement progressively segregates early mouse lineages" by Y. Ohnishi, W. Huber, A. Tsumura, M. Kang, P. Xenopoulos, K. Kurimoto, A. K. Oles, M. J. Arauzo-Bravo, M. Saitou, A.-K. Hadjantonakis and T. Hiiragi; Nature Cell Biology (2014) 16(1): 27-37. doi: 10.1038/ncb2881."

Author: Andrzej Oles [aut], Wolfgang Huber [aut, cre]

Maintainer: Wolfgang Huber <wolfgang.huber at embl.org>

Citation (from within R, enter citation("Hiiragi2013")):

Andrzej Oles, Wolfgang Huber. Hiiragi2013: Cell-to-cell expression variability followed by signal reinforcement progressively segregates early mouse lineages. doi:10.18129/B9.bioc.Hiiragi2013, R package version 1.49.5, https://bioconductor.org/packages/Hiiragi2013.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("Hiiragi2013")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Hiiragi2013")

Hiiragi2013	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, MicroarrayData, ReproducibleResearch, qPCRData
Version	1.49.5
In Bioconductor since	BioC 2.13 (R-3.0) (13 years)
License	Artistic-2.0
Depends	R (>= 4.0.0), Biobase
Imports	MASS, cluster, gplots, grDevices, grid, lattice, latticeExtra, genefilter
System Requirements
URL

Suggests	affy, BiocStyle, boot, clue, geneplotter, gtools, KEGGREST, mouse4302.db, xtable
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Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Hiiragi2013_1.49.5.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/Hiiragi2013
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Hiiragi2013
Package Short Url	https://bioconductor.org/packages/Hiiragi2013/
Package Downloads Report	Download Stats