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This is the development version of GSE62944; for the stable release version, see GSE62944.

GEO accession data GSE62944 as a SummarizedExperiment

Bioconductor version: Development (3.20)

TCGA processed RNA-Seq data for 9264 tumor and 741 normal samples across 24 cancer types and made them available as GEO accession [GSE62944]( GSE62944 data have been parsed into a SummarizedExperiment object available in ExperimentHub.

Author: Sonali Arora

Maintainer: Bioconductor Package Maintainer <maintainer at>

Citation (from within R, enter citation("GSE62944")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Raw TCGA data using Bioconductor's ExperimentHub HTML R Script
Reference Manual PDF


biocViews DNASeqData, ExperimentData, Genome, RNASeqData
Version 1.33.0
License Artistic-2.0
Depends Biobase, GEOquery
System Requirements
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Suggests ExperimentHub(>= 0.99.6), knitr, BiocStyle, rmarkdown, DESeq2
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Depends On Me
Imports Me
Suggests Me GSEABenchmarkeR
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Source Package GSE62944_1.33.0.tar.gz
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