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GEO accession data GSE62944 as a SummarizedExperiment

Bioconductor version: Release (3.19)

TCGA processed RNA-Seq data for 9264 tumor and 741 normal samples across 24 cancer types and made them available as GEO accession [GSE62944]( GSE62944 data have been parsed into a SummarizedExperiment object available in ExperimentHub.

Author: Sonali Arora

Maintainer: Bioconductor Package Maintainer <maintainer at>

Citation (from within R, enter citation("GSE62944")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Raw TCGA data using Bioconductor's ExperimentHub HTML R Script
Reference Manual PDF


biocViews DNASeqData, ExperimentData, Genome, RNASeqData
Version 1.32.0
License Artistic-2.0
Depends Biobase, GEOquery
System Requirements
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Suggests ExperimentHub(>= 0.99.6), knitr, BiocStyle, rmarkdown, DESeq2
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Depends On Me
Imports Me
Suggests Me GSEABenchmarkeR
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Source Package GSE62944_1.32.0.tar.gz
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