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ChIPexoQualExample

This is the development version of ChIPexoQualExample; for the stable release version, see ChIPexoQualExample.

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3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5

Example data for the ChIPexoQual package, which implements a quality control pipeline for ChIP-exo data

DOI: 10.18129/B9.bioc.ChIPexoQualExample

Bioconductor version: Development (3.24)

Data for the ChIPexoQual package, consisting of (3) chromosome 1 aligned reads from a ChIP-exo experiment for FoxA1 in mouse liver cell lines aligned to the mm9 genome.

Author: Rene Welch, Dongjun Chung, Sunduz Keles

Maintainer: Rene Welch <welch at stat.wisc.edu>

Citation (from within R, enter citation("ChIPexoQualExample")):

Rene Welch, Dongjun Chung, Sunduz Keles. ChIPexoQualExample: Example data for the ChIPexoQual package, which implements a quality control pipeline for ChIP-exo data. doi:10.18129/B9.bioc.ChIPexoQualExample, R package version 1.37.0, https://bioconductor.org/packages/ChIPexoQualExample.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("ChIPexoQualExample")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChIPexoQualExample")

Details

Package Archives

Follow Installation instructions to use this package in your R session.