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SNPlocs.Hsapiens.dbSNP149.GRCh38

This is the development version of SNPlocs.Hsapiens.dbSNP149.GRCh38; for the stable release version, see SNPlocs.Hsapiens.dbSNP149.GRCh38.

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SNP locations for Homo sapiens (dbSNP Build 149)

DOI: 10.18129/B9.bioc.SNPlocs.Hsapiens.dbSNP149.GRCh38

Bioconductor version: Development (3.24)

SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 149. The source data files used for this package were created by NCBI between November 8-12, 2016, and contain SNPs mapped to reference genome GRCh38.p7 (a patched version of GRCh38 that doesn't alter chromosomes 1-22, X, Y, MT). Note that these SNPs can be "injected" in BSgenome.Hsapiens.NCBI.GRCh38 or in BSgenome.Hsapiens.UCSC.hg38.

Author: Hervé Pagès

Maintainer: H. Pagès <hpages at fredhutch.org>

Citation (from within R, enter citation("SNPlocs.Hsapiens.dbSNP149.GRCh38")):

Hervé Pagès. SNPlocs.Hsapiens.dbSNP149.GRCh38: SNP locations for Homo sapiens (dbSNP Build 149). doi:10.18129/B9.bioc.SNPlocs.Hsapiens.dbSNP149.GRCh38, R package version 0.99.21, https://bioconductor.org/packages/SNPlocs.Hsapiens.dbSNP149.GRCh38.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("SNPlocs.Hsapiens.dbSNP149.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

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Follow Installation instructions to use this package in your R session.